Factsheet for HORVU5Hr1G094210.8

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G076010.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G43670.1	HORVU1Hr1G076010.1	AT3G16310.1	21798944
AT5G43670.1	HORVU3Hr1G026980.2	AT3G16310.1	21798944
AT5G43670.1	HORVU3Hr1G071060.1	AT3G16310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P11140_001	Banana	cytosol	29.73	81.09
TraesCS5D01G391900.1	Wheat	cytosol	76.27	76.06
TraesCS5A01G382500.2	Wheat	cytosol	76.0	75.8
TraesCS5B01G386700.1	Wheat	cytosol	74.8	74.6
EER93475	Sorghum	cytosol	70.4	70.12
Os03t0742800-02	Rice	cytosol	70.67	70.01
Zm00001d013301_P002	Maize	cytosol	70.27	69.99
Zm00001d033975_P002	Maize	cytosol	68.4	65.43
KRG97332	Soybean	cytosol	51.33	52.74
Solyc03g005380.2.1	Tomato	cytosol, golgi, plasma membrane	52.13	50.26
Bra033691.1-P	Field mustard	cytosol	49.2	49.86
CDY22339	Canola	cytosol	48.93	49.59
CDX94717	Canola	cytosol	49.07	48.94
AT5G43670.1	Thale cress	cytosol	50.13	47.36
HORVU4Hr1G014740.3	Barley	cytosol	39.33	38.76
HORVU5Hr1G068810.2	Barley	cytosol	38.0	37.4
VIT_05s0020g04710.t01	Wine grape	plasma membrane	54.67	36.19
HORVU4Hr1G041690.2	Barley	cytosol, nucleus	38.4	34.74
GSMUA_Achr4P11150_001	Banana	cytosol	13.33	25.51
HORVU3Hr1G044780.1	Barley	cytosol	14.8	15.1
PGSC0003DMT400034845	Potato	cytosol	4.13	12.6

Protein Annotations

Gene3D:1.20.120.730	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410	UniProt:A0A287SBB6	InterPro:ADF-H/Gelsolin-like_dom_sf
GO:GO:0000139	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf
EnsemblPlantsGene:HORVU5Hr1G094210	EnsemblPlants:HORVU5Hr1G094210.8	InterPro:IPR029006	InterPro:IPR036465	PFAM:PF00626	PFAM:PF04811
PFAM:PF04815	PFAM:PF08033	PRINTS:PR01217	PANTHER:PTHR11141	PANTHER:PTHR11141:SF4	SUPFAM:SSF53300
SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf
InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	InterPro:Sec23_C	UniParc:UPI000B46BFAA	SEG:seg	InterPro:vWFA_dom_sf

Description

No Description!

Coordinates

chrchr5H:-:594550071..594553323

Molecular Weight (calculated)

82780.7 Da

IEP (calculated)

10.483

GRAVY (calculated)

-0.393

Length

750 amino acids

Sequence
(BLAST)

001: WTSRSWRPWR ASAGRGTRGR RRPPPRRRWS SPPRCSARRS TRRRPTCSRS SPTRPSAAPP RPAPLPSTPS PASTTPPPAG PAPSAAPWPT PTRATSPPTP
101: SPPSSSPPTP ASSTRSPRTP PRWTRPQSSS SSTRPPRGTS SPRLRPSCSG SCRGCPRGSG WRSSPSRRRC GCTISASKAA PGWSCSTGSG SSSRIRSIQQ
201: LLGVRHSRYN KLATLKPIEV QRFLLPVSEC EFSITSAIED LSSLSACPRG HRPLRATGAA ISTAIALLEG CCSPNSGGRI IVFTSGPTTV GPGLVVETDL
301: GKAIRSHRDI FNGNVPLVEK AQDFYKKVAK RLTDSALVLD LLACSLDQIG AAELRYPVEV SGGLMVLTES FESEQFKSCL RQTFKRDGTD YLNMNFNATI
401: EVVTSREVRI CGALGPCISL HRKNSSVSDK QIGEGGTNYW RMSTLDSKTC IAFFFRADCS RDTDPPTVFF IQFMTRYRHG DGSNRLRVTT VARRWAGPRS
501: PEIAAGFDQE AAAAVMARLA VHRAETYHVR DVIRWLDKML IRFTAKFGNY VPEDPSTFRL STNFSLYPQF MYYLRRSQFI DVGNSSPDET AFFRLMLNRE
601: GVVGSLIMIQ PTLFQYSFDG PPIPVLLDVS SISPDVILLF DSYFYIVIHY GSKIAQWRKL GYHKDPNHEN LRKLLEAPEV DAEALLADRF PVPKLIKCDQ
701: HGSQARFLLA RLNPSVTQKS QLSEGSEVIF TDDVCLQVFI EHLQELAVQG

Best Arabidopsis Sequence Match ( AT1G05520.1 )
(BLAST)

001: MSEMASMDPE GIDGVRMTWN VWPRTKVEAS KCVIPVAACI SPIRYHRDIP SVEYAPLRCR ICTAALNPFA RVDFLAKIWI CPICFQRNHF PPHYHVMSET
101: NVPCELYPQY TTVEYTLPNP SQPTGVGNFD QTGAVSGQPS PSVFVFVLDT CMIEEEFGYA KSALKQAIGL LPENALVGFV SFGTQAHVHE LGFSDLTKVY
201: VFRGDKEISK DQVLEQLGLG ASGRRNPVGG FPMGRDNSAN FGYSGVNRFL LPASDCEFTI DLLLEELQTD QWPVQAGRRQ SRCTGVAISV ATGLLGACFP
301: GTGARIVALI GGPCSEGPGT IVSKDLSEPL RSHKDLDKDA APFYKKAEKF YDALANQLVN QGHVLDLFAS ALDQVGVAEM KAAVERTGGL VVLSESFGHS
401: VFKDSFKRVF EDGEESLGLC FNGTLEICCS KDIKIQGIIG PCASLQKKGP SVADTVIGEG NTTQWKMCGL DKRTCLTVFF DLSSSDQSSA PGGVNNQLYL
501: QFMTSYQNSK GKTLQRVTTV TRQWVDTGLS TEELVQGFDQ ETAAVVVARL ASLKMETEEG FDATRWLDRN LIRLCSKFGD YRKDDPASFT LNPNFSLFPQ
601: FTFNLRRSQF VQVFNNSPDE TAYNRMLLNR ENISNAAVMI QPSLTTYSFN SLPQPALLDV ASIGADRILL LDSYISVVVF HGMTIAQWRN LGYQNQPEHQ
701: AFAQLLEAPQ EDAQMIIRDR FPVPRLVVCD QHGSQARFLL AKLNPSATYN NASEMNAGSD IIFTDDVSLQ VFFQHLQKLA VQS

Arabidopsis Description

At1g05520/T25N20_16 [Source:UniProtKB/TrEMBL;Acc:Q8H0S3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.