Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G43670.1 | KRH09922 | AT3G16310.1 | 21798944 |
| AT5G43670.1 | KRH23409 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P11140_001 | Banana | cytosol | 27.67 | 73.45 |
| Bra033691.1-P | Field mustard | cytosol | 63.42 | 62.57 |
| CDY22339 | Canola | cytosol | 63.29 | 62.43 |
| Solyc03g005380.2.1 | Tomato | cytosol, golgi, plasma membrane | 66.03 | 61.95 |
| CDX94717 | Canola | cytosol | 63.29 | 61.44 |
| TraesCS5A01G382500.2 | Wheat | cytosol | 61.23 | 59.44 |
| TraesCS5D01G391900.1 | Wheat | cytosol | 61.1 | 59.31 |
| EER93475 | Sorghum | cytosol | 60.96 | 59.1 |
| AT5G43670.1 | Thale cress | cytosol | 64.25 | 59.07 |
| Zm00001d013301_P002 | Maize | cytosol | 60.82 | 58.96 |
| TraesCS5B01G386700.1 | Wheat | cytosol | 60.27 | 58.51 |
| Os03t0742800-02 | Rice | cytosol | 60.0 | 57.86 |
| Zm00001d033975_P002 | Maize | cytosol | 60.14 | 55.99 |
| HORVU5Hr1G094210.8 | Barley | cytosol, plastid | 52.74 | 51.33 |
| PGSC0003DMT400034845 | Potato | cytosol | 15.48 | 45.94 |
| VIT_05s0020g04710.t01 | Wine grape | plasma membrane | 69.73 | 44.92 |
| KRH66226 | Soybean | cytosol, endoplasmic reticulum | 45.21 | 43.02 |
| KRH07342 | Soybean | cytosol | 44.52 | 42.48 |
| KRG97365 | Soybean | cytosol, endoplasmic reticulum, nucleus | 44.25 | 42.17 |
| KRH31551 | Soybean | endoplasmic reticulum | 43.97 | 41.85 |
| GSMUA_Achr4P11150_001 | Banana | cytosol | 20.68 | 38.52 |
| KRH68337 | Soybean | nucleus | 17.53 | 14.7 |
| KRG96600 | Soybean | nucleus | 17.4 | 14.58 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr18:+:134883..137559
Molecular Weight (calculated)
81764.0 Da
IEP (calculated)
6.655
GRAVY (calculated)
-0.044
Length
730 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLVELEAVE GLRWAWNSWA ADGTNMIIPL SIMCTPLMLL NSEVPLLPYD PLLCSRCGAV LNPYARLDYQ SRIWHCPFCS LRNPFPRPIA DTNLPAELFP
101: TYSTVEYSSP SPSPPPPPPA FVFLLDLSTP QDELPPLKNQ LLHLLHHLPD HSLVSLITFD SMVYLHHLSS SHFSSLLVFH GNRHLSSNQI RHFLNPHRHQ
201: AFLLPISECQ FSITTAIEEI HSTSNSTISA SRPPRCTGSA ISVALGLLES CPINTGSRIL VFTSGPATLG PGIVVDSDRR QPIRTHHHIF NAQATHYAKS
301: SAFYNQLSKR LSGASVVLDL FACSLDQVGA AELRGPVEHS GGFIVLSESF DSDQFKNCLR QMFRCDDQGH LRMNFDATIE IVTTKDVKIC GALGPCVSLE
401: RNNCLVSEAE VGEGGTSVWK LNTLTHKTCI AFFFQVNQEQ KMKIQPGSAF LIQFITRYRQ GNMIRKRVTT AARRWVASHS ADIGAGFDQE AAAAVMARLA
501: ILRAETCHAR DVIRWLDDTL IRFTSKFGDY VPEDPSSFRL SSNFSLYPQF MYHLRRSQFI DVSNTTPDET AFFRLVLNRE GVVGSLIMIQ PTLFQYSFDG
601: PPVPVLLDIR SISPDFILLF DSFFCVVIHY GSKIAQWRKL GYDKDPNHES LRKLLEAPEL DAEQLVADRL PVPRIIRCDQ HSSQARFLLA KLNPSVTQNS
701: TYTEGSDIIF TDDLSLEVFL DQLQVLAVQS
101: TYSTVEYSSP SPSPPPPPPA FVFLLDLSTP QDELPPLKNQ LLHLLHHLPD HSLVSLITFD SMVYLHHLSS SHFSSLLVFH GNRHLSSNQI RHFLNPHRHQ
201: AFLLPISECQ FSITTAIEEI HSTSNSTISA SRPPRCTGSA ISVALGLLES CPINTGSRIL VFTSGPATLG PGIVVDSDRR QPIRTHHHIF NAQATHYAKS
301: SAFYNQLSKR LSGASVVLDL FACSLDQVGA AELRGPVEHS GGFIVLSESF DSDQFKNCLR QMFRCDDQGH LRMNFDATIE IVTTKDVKIC GALGPCVSLE
401: RNNCLVSEAE VGEGGTSVWK LNTLTHKTCI AFFFQVNQEQ KMKIQPGSAF LIQFITRYRQ GNMIRKRVTT AARRWVASHS ADIGAGFDQE AAAAVMARLA
501: ILRAETCHAR DVIRWLDDTL IRFTSKFGDY VPEDPSSFRL SSNFSLYPQF MYHLRRSQFI DVSNTTPDET AFFRLVLNRE GVVGSLIMIQ PTLFQYSFDG
601: PPVPVLLDIR SISPDFILLF DSFFCVVIHY GSKIAQWRKL GYDKDPNHES LRKLLEAPEL DAEQLVADRL PVPRIIRCDQ HSSQARFLLA KLNPSVTQNS
701: TYTEGSDIIF TDDLSLEVFL DQLQVLAVQS
001: MDFLELEAIE GLRWSWNSWP TTKSDCESLV VPLSIMYTPL MHFSELPTIP YDPLICSRCG AVLNPYARVD YQSRIWSCPF CFHKNLFPRS YSGITETNLP
101: AELFPTYSAV EYSPLPSRQS GSNTTTPTAA ASWSNGFNQG VRSMPSNSSF SSLASSTVGG GGGVISELGP AFVFVVDASM VEDELRAVRS DVLFVIEQLP
201: ENCLVALITF DSMVRVYDLG FSECSKVVVF HGERDLSPDQ IQQFLGLGYS KQFHHGKMSA IRKQSFLLPL VECEFNLTSA FEEIIPLVDV KPGHRPHRST
301: GAAISTALGL LEGCSVTTGS RIMVFTSGPA TRGPGIIVDS DLSNSIRTHR DIITGHVSYY DKSCGFYKKL AKRLCDSSVV LDVFACSLDQ VGAAELRYAV
401: EMSGGFLLLG ETFESEQFKK CLRHIFIRDA DGNLSMYFDV SLEVVTTKDM RICGALGPVV SLRQKNDIVS ETEIGEGGTY MWKTSTVTNK TCVSFFFHVS
501: NEQNRKPQPG SAFFIQFITR YRYGNGAMRK RVTTVARRWV AGKSPEISSS FDQETAASVM ARLAINRAEE CHARDVITWL DNGLIRFASR FGDYIQEDPS
601: SFRLTPNFSL YPQFMFYLRR SQFLDVFNNS PDETGFFRLM LNREGVVNSI IMIQPTLLRY SFDGPPVPVL LDIRSVTPDV ILLFDSYFYV VIHHGSKIAQ
701: WRKLEYHKDP SHETFRNLLE APEIDAAQLV TDRIPMPRIV RCDQHGSQAR FLLAKLNPSV TQKTDHTGGS DIVLTDDMSL QDFLEDLQSL AVKG
101: AELFPTYSAV EYSPLPSRQS GSNTTTPTAA ASWSNGFNQG VRSMPSNSSF SSLASSTVGG GGGVISELGP AFVFVVDASM VEDELRAVRS DVLFVIEQLP
201: ENCLVALITF DSMVRVYDLG FSECSKVVVF HGERDLSPDQ IQQFLGLGYS KQFHHGKMSA IRKQSFLLPL VECEFNLTSA FEEIIPLVDV KPGHRPHRST
301: GAAISTALGL LEGCSVTTGS RIMVFTSGPA TRGPGIIVDS DLSNSIRTHR DIITGHVSYY DKSCGFYKKL AKRLCDSSVV LDVFACSLDQ VGAAELRYAV
401: EMSGGFLLLG ETFESEQFKK CLRHIFIRDA DGNLSMYFDV SLEVVTTKDM RICGALGPVV SLRQKNDIVS ETEIGEGGTY MWKTSTVTNK TCVSFFFHVS
501: NEQNRKPQPG SAFFIQFITR YRYGNGAMRK RVTTVARRWV AGKSPEISSS FDQETAASVM ARLAINRAEE CHARDVITWL DNGLIRFASR FGDYIQEDPS
601: SFRLTPNFSL YPQFMFYLRR SQFLDVFNNS PDETGFFRLM LNREGVVNSI IMIQPTLLRY SFDGPPVPVL LDIRSVTPDV ILLFDSYFYV VIHHGSKIAQ
701: WRKLEYHKDP SHETFRNLLE APEIDAAQLV TDRIPMPRIV RCDQHGSQAR FLLAKLNPSV TQKTDHTGGS DIVLTDDMSL QDFLEDLQSL AVKG
Arabidopsis Description
At5g43670 [Source:UniProtKB/TrEMBL;Acc:Q84WI4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.