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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 1
  • cytosol 3
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:endoplasmic reticulum
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH07342 Soybean cytosol 95.44 95.69
PGSC0003DMT400004550 Potato cytosol 24.25 81.58
GSMUA_AchrUn_... Banana cytosol, mitochondrion 18.9 81.01
VIT_15s0045g00540.t01 Wine grape cytosol 80.44 79.0
Os08t0474700-01 Rice plasma membrane 76.66 77.06
GSMUA_AchrUn_... Banana cytosol 54.11 76.29
EER96867 Sorghum cytosol 75.75 76.25
Solyc01g081070.2.1 Tomato cytosol, nucleus 75.88 76.18
OQU80636 Sorghum cytosol 75.62 76.02
Zm00001d005902_P001 Maize cytosol 75.49 75.98
TraesCS5A01G241100.1 Wheat nucleus 73.27 73.75
HORVU5Hr1G068810.2 Barley cytosol 72.75 73.23
TraesCS5B01G239200.1 Wheat cytosol 72.75 73.23
TraesCS4B01G085800.1 Wheat cytosol 72.75 73.13
HORVU4Hr1G014740.3 Barley cytosol 72.49 73.06
TraesCS4A01G230100.1 Wheat cytosol 72.62 73.0
TraesCS6B01G307800.1 Wheat cytosol 63.49 72.8
TraesCS4D01G083800.1 Wheat cytosol 67.28 72.07
AT2G21630.1 Thale cress cytosol 68.71 69.25
CDY13800 Canola cytosol 65.58 66.71
Bra031206.1-P Field mustard cytosol 64.15 65.51
KRG97365 Soybean cytosol, endoplasmic reticulum, nucleus 63.36 63.45
KRH31551 Soybean endoplasmic reticulum 63.36 63.36
EER99932 Sorghum cytosol 29.86 63.26
Os09t0460200-00 Rice plasma membrane 46.68 62.05
TraesCS5D01G247600.1 Wheat cytosol, plastid 72.62 60.68
CDY59754 Canola cytosol 64.28 52.06
KRG97332 Soybean cytosol 43.02 45.21
KRH68337 Soybean nucleus 16.04 14.12
KRG96600 Soybean nucleus 16.04 14.12
Protein Annotations
Gene3D:1.20.120.730EntrezGene:100803793Gene3D:2.30.30.380Gene3D:2.60.40.1670MapMan:22.4.1.3.1Gene3D:3.40.20.10
Gene3D:3.40.50.410EMBL:ACUP02001924InterPro:ADF-H/Gelsolin-like_dom_sfEnsemblPlantsGene:GLYMA_03G091800GO:GO:0000139GO:GO:0003674
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794
GO:GO:0006810GO:GO:0006886GO:GO:0006888GO:GO:0008150GO:GO:0008270GO:GO:0009987
GO:GO:0015031GO:GO:0016020GO:GO:0016043GO:GO:0030127GO:GO:0090114InterPro:Gelsolin-like_dom
InterPro:Gelsolin-like_dom_sfUniProt:I1JMB0InterPro:IPR029006InterPro:IPR036465EnsemblPlants:KRH66226ProteinID:KRH66226
ProteinID:KRH66226.1PFAM:PF00626PFAM:PF04810PFAM:PF04811PFAM:PF04815PFAM:PF08033
PANTHER:PTHR11141PANTHER:PTHR11141:SF2SUPFAM:SSF53300SUPFAM:SSF81811SUPFAM:SSF81995SUPFAM:SSF82754
SUPFAM:SSF82919InterPro:Sec23InterPro:Sec23/24_helical_domInterPro:Sec23/24_helical_dom_sfInterPro:Sec23/24_trunk_domInterPro:Sec23_24_beta_S
InterPro:Sec23_CUniParc:UPI0002336D7BInterPro:Znf_Sec23_Sec24InterPro:Znf_Sec23_Sec24_sfSEG:segInterPro:vWFA_dom_sf
Description
hypothetical protein
Coordinates
chr3:-:27181129..27193568
Molecular Weight (calculated)
84808.5 Da
IEP (calculated)
6.019
GRAVY (calculated)
-0.001
Length
767 amino acids
Sequence
(BLAST)
001: MAEFLDLESQ DGVRMPWNVI PGTKQDAQNA VVPISAVYTP IKHFPSMPVL NYSPLRCRTC RSVLNPFCIV DFAAKIWICP FCFQRNHFPP HYSSISDDSL
101: PAELFPQYTT VEYNSDAAVG PTYNNPSVPP VFLFVVDTCV IEEEIGFLRS ALAQAVELLP ENSLVGLITF GTFVHVHELG FGAVPKTYVF KGSKDLTKDQ
201: LLEQMSFFAK KPRPAVGVVA GARDGLSPES ISRFLVPASE CEFTINSVLE ELQKDPWAVP ADQRAARCTS TALSIAAGLL GACVPGSAAR IMAFIGGPAT
301: EGPAPIVSKQ LSEPIRSHKD LDKDSVPHYH KCVKFYDGLS KQLVHQGHVL DLFACALDQV GIAELKTAVE RTGGLVVLAE SFGHSVFKDS LKRIFQSGDY
401: DLGLSSNGIF EINCSKDLKV QGIIGPCASL EKKGPLCSDV TIGQGGTSAW KMCGLDKSTS LCLFFDVVRK ETPDATIQST SNQFYFQFLT YYQNNGGQMR
501: LRVTTLSRRW VAGPESIQDL IAGFDQEAAA IVMARQVSFK METEAEFDPI RWLDKALINL CSRFGEFQKD TPSSFSLSPR LSIFPQFMFH LRRSQFVQVF
601: NNSPDETAYF RMILNRENVA NSVVMVQPSL ISYSFHAGPE PALLDVAAIA ADKILLLDSF FTVVIFHGST IAQWRKAGYH NEPEHQAFAQ LLRAPHDDAD
701: LIIKERFPVP RLVVCDQHGS QARFLLAKLN PSATYNTESY NPGGDIIFTD DVSFDVFLDH LQRLVVQ
Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)
001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H
Arabidopsis Description
At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.