CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66226	Soybean	cytosol, endoplasmic reticulum	95.69	95.44
PGSC0003DMT400004550	Potato	cytosol	24.05	80.7
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	18.56	79.33
VIT_15s0045g00540.t01	Wine grape	cytosol	80.92	79.26
Os08t0474700-01	Rice	plasma membrane	76.86	77.06
Solyc01g081070.2.1	Tomato	cytosol, nucleus	76.6	76.7
Zm00001d005902_P001	Maize	cytosol	75.56	75.85
EER96867	Sorghum	cytosol	75.56	75.85
OQU80636	Sorghum	cytosol	75.29	75.49
GSMUA_AchrUn_...	Banana	cytosol	53.59	75.37
TraesCS5A01G241100.1	Wheat	nucleus	73.33	73.62
TraesCS5B01G239200.1	Wheat	cytosol	72.94	73.23
HORVU5Hr1G068810.2	Barley	cytosol	72.68	72.97
TraesCS4B01G085800.1	Wheat	cytosol	72.42	72.61
HORVU4Hr1G014740.3	Barley	cytosol	72.16	72.54
TraesCS6B01G307800.1	Wheat	cytosol	63.27	72.35
TraesCS4A01G230100.1	Wheat	cytosol	72.16	72.35
TraesCS4D01G083800.1	Wheat	cytosol	66.93	71.51
AT2G21630.1	Thale cress	cytosol	69.28	69.65
CDY13800	Canola	cytosol	66.41	67.37
Bra031206.1-P	Field mustard	cytosol	64.97	66.18
EER99932	Sorghum	cytosol	29.93	63.26
KRH31551	Soybean	endoplasmic reticulum	63.01	62.84
KRG97365	Soybean	cytosol, endoplasmic reticulum, nucleus	62.88	62.79
Os09t0460200-00	Rice	plasma membrane	46.14	61.18
TraesCS5D01G247600.1	Wheat	cytosol, plastid	72.68	60.57
CDY59754	Canola	cytosol	65.1	52.59
KRG97332	Soybean	cytosol	42.48	44.52
KRH68337	Soybean	nucleus	15.69	13.78
KRG96600	Soybean	nucleus	15.69	13.78

Protein Annotations

Gene3D:1.20.120.730	EntrezGene:100791527	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10
Gene3D:3.40.50.410	EMBL:ACUP02009971	InterPro:ADF-H/Gelsolin-like_dom_sf	EnsemblPlantsGene:GLYMA_16G082400	GO:GO:0000139	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0008270	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom
InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006	InterPro:IPR036465	UniProt:K7MFW9	EnsemblPlants:KRH07342	ProteinID:KRH07342
ProteinID:KRH07342.1	PFAM:PF00626	PFAM:PF04810	PFAM:PF04811	PFAM:PF04815	PFAM:PF08033
PANTHER:PTHR11141	PANTHER:PTHR11141:SF2	SUPFAM:SSF53300	SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754
SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S
InterPro:Sec23_C	UniParc:UPI000233B04B	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf	SEG:seg	InterPro:vWFA_dom_sf

Description

hypothetical protein

Coordinates

chr16:+:9198804..9223828

Molecular Weight (calculated)

84622.3 Da

IEP (calculated)

5.811

GRAVY (calculated)

0.017

Length

765 amino acids

Sequence
(BLAST)

001: MAEFLDLESQ DGVRMPWNVI PGTKQDAQNA VVPVSAVYTP IKHFTSMPLL NYSPLRCRTC RSVLNPFCIV DFAAKIWICP FCFQRNHFPP HYASISDDSL
101: PAELFPQYTT VEYNSDAVGP TNTPSVPPVF LFVVDTCVIE EEIGFLRSAL AQAVELLPEN SLVGLITFGM FAHVHELGFG AVPKTYVFKG SKDVTKDQLL
201: EQMSFFAKKP RPAVGVVAGA RDGLSTESIS RFLVPASECE FTLNSVLEEL QKDPWAVPAD QRAARCTSTA LSIAASLLGA CVPGSAARIM AFIGGPATEG
301: PAPIVSKQLS EPIRSHKDLD KDSVPHYHNC VKFYDGLSKQ LVHQGHVLDL FACALDQVGI AELKTAVERT GGLVVLAESF GHSVFKDSLK RVFQSGDYDL
401: GLSSNGIFEI NCSKDLKVQG IIGPCASLEK KGPLCSDVVI GQGGTSAWKM CGLDKSTSLC LFFDVVRKET PDATMQSTSN QFYFQFLTYY QNNSGQMRLR
501: VTTLSRRWVA GPESIQDLIA GFDQEAAAIV MARQVSFKME TEAEFDPIRW LDKALINLCS RFGEFQKDTP SSFSLSPRLS IFPQFMFHLR RSQFVQVFNN
601: SPDETAYFRM ILNRENVTNS VVMVQPSLIC YSFHAGPEPA LLDVAAIAAD KILLLDSFFT VVIFHGSTIA QWRKAGYHNE PEHQAFAQLL LAPHDDSDLI
701: IKERFPVPRL VVCDQHGSQA RFLLAKLNPS ATYNTESYNP GGDIIFTDDV SFEVFLDHLQ RLVVQ

Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)

001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H

Arabidopsis Description

At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.