Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G241100.1 | Wheat | nucleus | 81.15 | 97.77 |
| TraesCS5B01G239200.1 | Wheat | cytosol | 80.94 | 97.51 |
| HORVU5Hr1G068810.2 | Barley | cytosol | 79.19 | 95.41 |
| EER96867 | Sorghum | cytosol | 72.88 | 87.8 |
| Zm00001d005902_P001 | Maize | cytosol | 72.66 | 87.53 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 15.9 | 81.56 |
| TraesCS4D01G083800.1 | Wheat | cytosol | 60.89 | 78.07 |
| PGSC0003DMT400004550 | Potato | cytosol | 19.28 | 77.63 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.46 | 73.35 |
| Os09t0460200-00 | Rice | plasma membrane | 45.97 | 73.14 |
| KRH07342 | Soybean | cytosol | 60.57 | 72.68 |
| KRH66226 | Soybean | cytosol, endoplasmic reticulum | 60.68 | 72.62 |
| Solyc01g081070.2.1 | Tomato | cytosol, nucleus | 59.7 | 71.73 |
| VIT_15s0045g00540.t01 | Wine grape | cytosol | 61.0 | 71.7 |
| AT2G21630.1 | Thale cress | cytosol | 52.51 | 63.34 |
| CDY13800 | Canola | cytosol | 50.33 | 61.27 |
| Bra031206.1-P | Field mustard | cytosol | 49.67 | 60.72 |
| TraesCS4D01G151400.1 | Wheat | golgi | 50.98 | 59.85 |
| CDY59754 | Canola | cytosol | 50.87 | 49.31 |
| TraesCS5D01G391900.1 | Wheat | cytosol | 35.62 | 43.48 |
| TraesCS3D01G198500.1 | Wheat | plastid | 14.71 | 15.96 |
Protein Annotations
| Gene3D:1.20.120.730 | Gene3D:2.30.30.380 | Gene3D:2.60.40.1670 | MapMan:22.4.1.3.1 | Gene3D:3.40.20.10 | Gene3D:3.40.50.410 |
| InterPro:ADF-H/Gelsolin-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006888 | GO:GO:0008150 | GO:GO:0008270 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030127 | GO:GO:0090114 | InterPro:Gelsolin-like_dom |
| InterPro:Gelsolin-like_dom_sf | InterPro:IPR029006 | InterPro:IPR036465 | PFAM:PF00626 | PFAM:PF04810 | PFAM:PF04811 |
| PFAM:PF04815 | PFAM:PF08033 | PANTHER:PTHR11141 | PANTHER:PTHR11141:SF9 | SUPFAM:SSF53300 | SUPFAM:SSF81811 |
| SUPFAM:SSF81995 | SUPFAM:SSF82754 | SUPFAM:SSF82919 | InterPro:Sec23 | InterPro:Sec23/24_helical_dom | InterPro:Sec23/24_helical_dom_sf |
| InterPro:Sec23/24_trunk_dom | InterPro:Sec23_24_beta_S | InterPro:Sec23_C | EnsemblPlantsGene:TraesCS5D01G247600 | EnsemblPlants:TraesCS5D01G247600.1 | InterPro:Znf_Sec23_Sec24 |
| InterPro:Znf_Sec23_Sec24_sf | TIGR:cd11287 | SEG:seg | InterPro:vWFA_dom_sf | : | : |
Description
No Description!
Coordinates
chr5D:+:354933479..354940267
Molecular Weight (calculated)
100983.0 Da
IEP (calculated)
7.807
GRAVY (calculated)
-0.135
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSETDSRRC RKSWGGINLP APRQPVSRTT TRRHRTGHAG RPRTSRPIRP RLRRAHPSPS SPNIGPTRPQ SGATSPLSSC RLSAESPPES GSHRALHRAA
101: SIASSSDAGA AGRHQEATCP PVSRCAAVFA SDPPVGYHFT CGGRLTLLAH KTAVYKMSEF LELEALDGIR MPWNVIPGTR EDAVSCVVPV SAIYTPLKSI
201: PDMPVVPYAP LRCRMCRSIL NPFSRVDYNA KIWLCTFCFQ RNQFPQHYSS ISENNLPPEL FPQYTTIEYI STAETGPVMP PVFIFVVDTC IIEEEIGYLK
301: SALAQATELL PDNSLIGFIT FGTYVQVHEL GFGLLPKSYV FKGTKEVSKE QILEQMCFFA GKQKPTTGVI AGTRDGLSSE SISRFLVPAS ECEFVLNSVI
401: EELQKDPWHI PADQRASRCT GAALSVAASL LGVCVPGSGA RIMAFVGGPS TEGPGSIVSK SLTEPIRSHK DLDKDSAPLF DKAVKFYDQI AKQLVHQGHV
501: LDLFACAVDQ VGVAEMKVAI EKTGGIVVLA ESFGHSVFKD SLLRIFQSAD NGLGLSFNGI LEINCSKDVK IQGIIGPCSS LEKKSPLSAD TVIGQGNTSA
601: WKMCGLDKKT SLCFVYDISR KVGPDTVAQQ TGKQLYLQFV TYYQHHEGQM RLRTTTISRQ WASGAATVQE LIDGFDQEAA AAVVARLVSF KMETEADFDP
701: IRWLDRALIR LCTKFGDYQK ETPSSFSLSP RLSIFPQFMF NLRRSQFVQV FNNSPDETAY FRMMLERENV GNAVAMIQPS LISYSFQSGP MPVLLDATAI
801: APDKILLLDS YFSVVIFHGI TIAQWRKAGY QDQEGHEAFA QLLKAPHDES DAIIKERFPV PRLVVCDQYG SQARFLLAKL NPSVTYNSDN PAPGGDVIFT
901: DDVSFEVFMD HLQRLAVQ
101: SIASSSDAGA AGRHQEATCP PVSRCAAVFA SDPPVGYHFT CGGRLTLLAH KTAVYKMSEF LELEALDGIR MPWNVIPGTR EDAVSCVVPV SAIYTPLKSI
201: PDMPVVPYAP LRCRMCRSIL NPFSRVDYNA KIWLCTFCFQ RNQFPQHYSS ISENNLPPEL FPQYTTIEYI STAETGPVMP PVFIFVVDTC IIEEEIGYLK
301: SALAQATELL PDNSLIGFIT FGTYVQVHEL GFGLLPKSYV FKGTKEVSKE QILEQMCFFA GKQKPTTGVI AGTRDGLSSE SISRFLVPAS ECEFVLNSVI
401: EELQKDPWHI PADQRASRCT GAALSVAASL LGVCVPGSGA RIMAFVGGPS TEGPGSIVSK SLTEPIRSHK DLDKDSAPLF DKAVKFYDQI AKQLVHQGHV
501: LDLFACAVDQ VGVAEMKVAI EKTGGIVVLA ESFGHSVFKD SLLRIFQSAD NGLGLSFNGI LEINCSKDVK IQGIIGPCSS LEKKSPLSAD TVIGQGNTSA
601: WKMCGLDKKT SLCFVYDISR KVGPDTVAQQ TGKQLYLQFV TYYQHHEGQM RLRTTTISRQ WASGAATVQE LIDGFDQEAA AAVVARLVSF KMETEADFDP
701: IRWLDRALIR LCTKFGDYQK ETPSSFSLSP RLSIFPQFMF NLRRSQFVQV FNNSPDETAY FRMMLERENV GNAVAMIQPS LISYSFQSGP MPVLLDATAI
801: APDKILLLDS YFSVVIFHGI TIAQWRKAGY QDQEGHEAFA QLLKAPHDES DAIIKERFPV PRLVVCDQYG SQARFLLAKL NPSVTYNSDN PAPGGDVIFT
901: DDVSFEVFMD HLQRLAVQ
001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H
Arabidopsis Description
At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.