CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G21630.1	Thale cress	cytosol	84.88	84.1
CDY59754	Canola	cytosol	91.64	72.97
PGSC0003DMT400004550	Potato	cytosol	20.95	69.3
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	16.45	69.27
KRH07342	Soybean	cytosol	67.37	66.41
VIT_15s0045g00540.t01	Wine grape	cytosol	68.04	65.69
KRH66226	Soybean	cytosol, endoplasmic reticulum	66.71	65.58
OQU80636	Sorghum	cytosol	65.65	64.88
Solyc01g081070.2.1	Tomato	cytosol, nucleus	65.65	64.79
Os08t0474700-01	Rice	plasma membrane	65.25	64.48
Zm00001d005902_P001	Maize	cytosol	63.4	62.73
EER96867	Sorghum	cytosol	63.4	62.73
HORVU4Hr1G014740.3	Barley	cytosol	62.86	62.29
TraesCS4B01G085800.1	Wheat	cytosol	62.86	62.12
TraesCS4A01G230100.1	Wheat	cytosol	62.86	62.12
TraesCS6B01G307800.1	Wheat	cytosol	55.04	62.03
TraesCS4D01G083800.1	Wheat	cytosol	58.62	61.73
GSMUA_AchrUn_...	Banana	cytosol	44.43	61.58
TraesCS5A01G241100.1	Wheat	nucleus	62.07	61.42
TraesCS5B01G239200.1	Wheat	cytosol	61.67	61.02
HORVU5Hr1G068810.2	Barley	cytosol	61.14	60.5
CDY12077	Canola	cytosol	55.57	56.85
CDY12738	Canola	cytosol	55.3	56.66
CDX90271	Canola	cytosol	55.3	56.5
CDY01197	Canola	cytosol	55.44	54.86
CDX86574	Canola	cytosol	55.04	54.11
CDY15544	Canola	cytosol	54.77	53.85
Os09t0460200-00	Rice	plasma membrane	40.45	52.86
TraesCS5D01G247600.1	Wheat	cytosol, plastid	61.27	50.33
EER99932	Sorghum	cytosol	23.87	49.72
CDY12241	Canola	cytosol	37.8	46.88
CDY22339	Canola	cytosol	41.78	42.57
CDX94717	Canola	cytosol	41.91	42.02
CDY64015	Canola	cytosol	6.23	33.81
CDY22008	Canola	plastid	16.71	14.42
CDY07119	Canola	plastid	16.58	14.3

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
GO:A0A078FH87	UniProt:A0A078FH87	InterPro:ADF-H/Gelsolin-like_dom_sf	EnsemblPlants:CDY13800	ProteinID:CDY13800	ProteinID:CDY13800.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0008270	GO:GO:0015031
GO:GO:0016020	GO:GO:0030127	EnsemblPlantsGene:GSBRNA2T00078240001	InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006
InterPro:IPR036465	PFAM:PF00626	PFAM:PF04810	PFAM:PF04811	PFAM:PF04815	PFAM:PF08033
PANTHER:PTHR11141	PANTHER:PTHR11141:SF2	SUPFAM:SSF53300	SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754
SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S
UniParc:UPI0004EF0F12	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf	SEG:seg	InterPro:vWFA_dom_sf	:

Description

BnaA09g43020DBnaA09g43020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH87]

Coordinates

chrLK032038:-:447663..451046

Molecular Weight (calculated)

83220.0 Da

IEP (calculated)

6.110

GRAVY (calculated)

-0.018

Length

754 amino acids

Sequence
(BLAST)

001: MAEFAELEAQ DGIPVSAIYT PLAPSTSLLP YAPLRCRTCR SVLNPYSVVD FSASTWGCPF CFNRNPFPST YSSISDTNLP PELFPHSTTV EYLSDSSSSS
101: SSPPPVFLFV VDTCLFSDEL DFLRSSLFQA LDLIPDASVV GLIAFDSLVR VYELGFPHCT KSYFFHGNKD CSKDQLLDQL SFFVKSPKPS SGVIAGVRDG
201: LSAEDIARFL PPASDCQFTL HSVLEELGSS QWPAAPDHRP GRCTGVALRI AACLLGACFP GAAARIMAFI GGPSTLGPGA IVSRELSEPI RSHKDIGKDS
301: APYYQEAVEF YEKLAKQLVH QGHVLDVFAS SVDQVGIAEM KVAVEQTGGF VVLAESFGHS VFRESLKRVF QSGENDLGLS SCGIFEINCS KGVKVQGVIG
401: PCASLEKKGP LCSDTGIGQG HTSAWKMCGL DKSTSVCLVF EIAKRETADV VLQSQINQFY FQFLTYYQHS NGQTRLRVTT LSRRWVMGTE NLQAKVMFLS
501: SYIYDLTELT NGFDQEAAAV VMARLISFKM ETQPEFNPQR WADKALVNLC SRFGEYQKGN ASSFNLPSQL SNFPQFVFHL RRSQFVQVFN NSPDETAYFR
601: MILNRENVSN SIVMIQPSLV SFTFNSQPEP IPLDVASIAA DRILLLDAYF TLVIFHGATI AQWRKAGYHH QPEHQALVHL LQSPRDYSDT IINERFPIPR
701: LVICDQYGSQ ARFLLAKLNP SSDGNGPFSG GSNVFTDDVS LSVFLDHLRR LIVH

Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)

001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H

Arabidopsis Description

At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.