CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0474700-01	Rice	plasma membrane	91.09	91.09
TraesCS4B01G085800.1	Wheat	cytosol	86.89	86.89
EER96867	Sorghum	cytosol	86.76	86.88
TraesCS4A01G230100.1	Wheat	cytosol	86.5	86.5
HORVU4Hr1G014740.3	Barley	cytosol	86.24	86.47
TraesCS6B01G307800.1	Wheat	cytosol	75.62	86.25
TraesCS4D01G083800.1	Wheat	cytosol	80.6	85.89
EER99932	Sorghum	cytosol	39.97	84.25
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	19.4	82.68
GSMUA_AchrUn_...	Banana	cytosol	57.54	80.7
PGSC0003DMT400004550	Potato	cytosol	23.33	78.07
KRH66226	Soybean	cytosol, endoplasmic reticulum	76.02	75.62
VIT_15s0045g00540.t01	Wine grape	cytosol	77.33	75.54
KRH07342	Soybean	cytosol	75.49	75.29
Solyc01g081070.2.1	Tomato	cytosol, nucleus	74.84	74.74
AT2G21630.1	Thale cress	cytosol	67.76	67.94
CDY13800	Canola	cytosol	64.88	65.65
Bra031206.1-P	Field mustard	cytosol	63.7	64.71
OQU83385	Sorghum	cytosol, plastid	63.56	61.16
CDY59754	Canola	cytosol	63.43	51.11
EER93475	Sorghum	cytosol	44.69	45.29
EES02883	Sorghum	cytosol, plastid	17.17	15.09

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
EntrezGene:8056897	InterPro:ADF-H/Gelsolin-like_dom_sf	UniProt:C5YMB3	ProteinID:EES14005.1	GO:GO:0000139	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0008270	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom
InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006	InterPro:IPR036465	EnsemblPlants:OQU80636	ProteinID:OQU80636	ProteinID:OQU80636.1
PFAM:PF00626	PFAM:PF04810	PFAM:PF04811	PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141
PANTHER:PTHR11141:SF9	EnsemblPlantsGene:SORBI_3007G157000	SUPFAM:SSF53300	SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754
SUPFAM:SSF82919	unigene:Sbi.12646	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom
InterPro:Sec23_24_beta_S	InterPro:Sec23_C	UniParc:UPI0001A87ACD	RefSeq:XP_002444510.1	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:59133969..59141420

Molecular Weight (calculated)

84195.8 Da

IEP (calculated)

5.233

GRAVY (calculated)

-0.002

Length

763 amino acids

Sequence
(BLAST)

001: MSEFLDLETQ DGIRMTWNVI PGTKQDATNC VVPVSAIYTP LKPNPSIPVL PYAPLRCRMC RSILNPFSVV DFVAKIWVCP FCFQRNHFPQ HYNSISENNL
101: PAELFPQYTT VEYASTSETG PVAPPVFLFV VDTCMIEEEI GYLKSALAQA IELLPDQSLV GFITFGTYVQ VHELGFGLLP KSYVFKGTKE VTKEQILDQM
201: SFFAGKTKPT SGVIAGARDG LSAESIARFL LPASECEFVL NSVIEELQKD PWPVPADKRS SRCTGVALSV AASLLGVCVP GSGARIMAFV GGPSTEGPGS
301: IVSKSLSEPI RSHKDLDKGS APLYNKAVKF YEDISKQLVN QGHVLDLFAC ALDQVGVAEM KVAVERTGGI VVLAESFGHS VFKDSLRRIF QSSDNDLDLS
401: FNGIFEINCS KDVKIQGIIG PCTSLEKKSP LSSDTVVGQG NTNAWKMCGL DRKTSLCLVF DIAKKDGPDS VGVGQSASNQ FYFQFLTYYQ HHEGQMRLRA
501: TTLSRRWVAG SGGVQELIDG FDQEAAAAVM ARLVSFKMEA EADFDPIRWL DRALISLCSK FGDYHKETPS SFSLSPRLSI FPQFIFNLRR SQFVQVFNNS
601: PDETAYFTMM LNRENVSNAV VMIQPSLISY SFQSGPEPVL LDVTAIAADR ILLLDSYFTV VIFHGITIAQ WRKAGYQYQE GHESFAQLLQ APQEEADAII
701: KERFPVPRLV VCDQYGSQAR FLLAKLNPSV SYDNPPAPGG DVIFTDDVSF QVFMDHLQRL AVN

Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)

001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H

Arabidopsis Description

At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.