Factsheet for TraesCS4A01G230100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G085800.1	Wheat	cytosol	98.03	98.03
HORVU4Hr1G014740.3	Barley	cytosol	97.25	97.5
TraesCS4D01G083800.1	Wheat	cytosol	91.48	97.49
TraesCS6B01G307800.1	Wheat	cytosol	85.45	97.46
Os08t0474700-01	Rice	plasma membrane	87.29	87.29
OQU80636	Sorghum	cytosol	86.5	86.5
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	19.66	83.8
TraesCS5A01G241100.1	Wheat	nucleus	80.34	80.45
PGSC0003DMT400004550	Potato	cytosol	23.2	77.63
VIT_15s0045g00540.t01	Wine grape	cytosol	76.28	74.52
GSMUA_AchrUn_...	Banana	cytosol	52.69	73.9
Solyc01g081070.2.1	Tomato	cytosol, nucleus	73.26	73.17
KRH66226	Soybean	cytosol, endoplasmic reticulum	73.0	72.62
KRH07342	Soybean	cytosol	72.35	72.16
EER99932	Sorghum	cytosol	33.03	69.61
AT2G21630.1	Thale cress	cytosol	65.66	65.83
CDY13800	Canola	cytosol	62.12	62.86
Bra031206.1-P	Field mustard	cytosol	61.07	62.05
TraesCS4A01G151800.3	Wheat	cytosol, plastid	62.65	60.81
CDY59754	Canola	cytosol	60.81	49.0
TraesCS5A01G382500.2	Wheat	cytosol	44.56	45.21
TraesCS3A01G195200.1	Wheat	plastid	16.51	14.89

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
InterPro:ADF-H/Gelsolin-like_dom_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0008150
GO:GO:0008270	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0090114
InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006	InterPro:IPR036465	PFAM:PF00626	PFAM:PF04810
PFAM:PF04811	PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF2	SUPFAM:SSF53300
SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom
InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	InterPro:Sec23_C	EnsemblPlantsGene:TraesCS4A01G230100	EnsemblPlants:TraesCS4A01G230100.1
InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf	TIGR:cd11287	SEG:seg	InterPro:vWFA_dom_sf	:

Description

No Description!

Coordinates

chr4A:+:539288267..539295938

Molecular Weight (calculated)

83971.9 Da

IEP (calculated)

5.533

GRAVY (calculated)

0.011

Length

763 amino acids

Sequence
(BLAST)

001: MSEFLELEAR DGVRMTWNVI PGTKQDAASC VVPVSAMYTP LNPNPAIPVL PYAPLRCRIC RSILNPFSVA DFGSKMWLCP FCFQRNHFPQ QYSAVSQSNL
101: PTELYPECCT VEYMAAAEAG PVSPPVFLFV VDTCMIEEEI GYLKSALAQA VELLPDHSLV GFITFGTYVQ VHELGFGLLP KSHVFKGTKE IKKDQILEQM
201: GFLTGKTKPT TGVIAGARDG VSAESIARFL LPASECEFIL NSLIEELQKD PWPVSADQRA SRCTGAALSV AASLLGICVP GSGGRIMAFI GGPSTEGPGS
301: IISKPLSDPI RSHKDLDKGS APLYNKAVKF YEEIGSQLVH QGHVLDLFAC ALDQVGVAEM KVAVERTGGI VVLAESFGHS VFKDSLRRIF QSSDSDLGLS
401: FNGIFEINCS KDVKIQGIIG PCTSLEKKGP LSSDTVVGQG NTSAWKMCGL DRKTSLCVVF DMAKKDAPDA IGQSQNNLFY FQFLTYYQHH DGQMRLRSTT
501: ISRRWVAGSG SVQELITGFD QEAAAAVMAR LVSFKMEAEV DFDPVRWLDR ALISLCSKFG DYQKEAPSSF SLSPRLSIFP QFIFNLRRSQ FIQVFNNSPD
601: ETAYFRMMLN RENVANAVVM IQPSLISYSF QSGPEPVLLD VSAIAGDRIL LLDSYFTVVI FHGITIAQWR KAGYQHQEGH EVFAQLLQAP QEEADSIIKE
701: RFPVPRLVVC DQYGSQARFL LAKLNPSVTY DSDTPPPPGG DMIFTDDASF QVFMEHLQRL AVQ

Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)

001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H

Arabidopsis Description

At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.