Factsheet for HORVU4Hr1G014740.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G230100.1	Wheat	cytosol	97.5	97.25
TraesCS4B01G085800.1	Wheat	cytosol	97.11	96.85
TraesCS6B01G307800.1	Wheat	cytosol	84.36	95.96
TraesCS4D01G083800.1	Wheat	cytosol	90.28	95.95
Os08t0474700-01	Rice	plasma membrane	87.25	87.02
OQU80636	Sorghum	cytosol	86.47	86.24
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	19.84	84.36
HORVU5Hr1G068810.2	Barley	cytosol	79.5	79.4
PGSC0003DMT400004550	Potato	cytosol	23.26	77.63
VIT_15s0045g00540.t01	Wine grape	cytosol	75.95	74.01
GSMUA_AchrUn_...	Banana	cytosol	52.69	73.71
Solyc01g081070.2.1	Tomato	cytosol, nucleus	73.06	72.77
KRH66226	Soybean	cytosol, endoplasmic reticulum	73.06	72.49
KRH07342	Soybean	cytosol	72.54	72.16
EER99932	Sorghum	cytosol	32.59	68.51
AT2G21630.1	Thale cress	cytosol	65.83	65.83
CDY13800	Canola	cytosol	62.29	62.86
Bra031206.1-P	Field mustard	cytosol	61.1	61.92
HORVU4Hr1G041690.2	Barley	cytosol, nucleus	62.29	57.18
CDY59754	Canola	cytosol	60.71	48.79
HORVU5Hr1G094210.8	Barley	cytosol, plastid	38.76	39.33
HORVU3Hr1G044780.1	Barley	cytosol	16.69	17.28

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
InterPro:ADF-H/Gelsolin-like_dom_sf	GO:GO:0000139	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0006888
GO:GO:0008150	GO:GO:0008270	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016043
GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf	EnsemblPlantsGene:HORVU4Hr1G014740	EnsemblPlants:HORVU4Hr1G014740.3
InterPro:IPR029006	InterPro:IPR036465	UniProt:M0X794	PFAM:PF00626	PFAM:PF04810	PFAM:PF04811
PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF2	SUPFAM:SSF53300	SUPFAM:SSF81811
SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf
InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	InterPro:Sec23_C	UniParc:UPI0002960AE0	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0X794]

Coordinates

chrchr4H:-:54569082..54577417

Molecular Weight (calculated)

83919.8 Da

IEP (calculated)

5.425

GRAVY (calculated)

-0.002

Length

761 amino acids

Sequence
(BLAST)

001: MSEFLELEAR DGVRMTWNVI PGTKQDAASC VVPVSAMYTP LNPNPAIPVL PYAPLRCRIC RAILNPFSVA DFNSKMWLCP FCFQRNHFPQ QYSTVSQSNL
101: PTELYPECCT VEYMATAETG PVSPPVFLFV VDTCMIEEEI GYLKSALAQA VELLPDQSLV GFITFGTYVQ VHELGFGLLP KSHVFKGTKE IKKDQILEQM
201: GFFAGKTKPG VIAGARDGVS AESIARFLLP ASECEFILNS LIEELQKDPW PVSADQRASR CTGAALSVAA SLLGICVPGS GGRIMAFIGG PSTEGPGSII
301: SKPLSDPIRS HKDLDKGSAP LYNKAVKFYE EIGNQLVHQG HVLDLFACAL DQVGVAEMKV AVERTGGIVV LAESFGHSVF KDSLRRIFQS SDSDLGLSFN
401: GIFEINCSKD VKVQGIIGPC TSLEKKGPLS SDTVVGQGNT SAWKMCGLDR KTSLCLVFDM AKKDAPDAIG QSQNNLFYFQ FLTYYQHHDG QMRLRATTLS
501: RRWVAGSGSV QELITGFDQE AAAAVMARLV SFKMEAEVDF DPVRWLDRAL ISLCSKFGDY QKEAPSSFSL SPRLSIFPQF IFNLRRSQFI QVFNNSPDET
601: AYFRMMLNRE NVANAVVMIQ PSLISYSFQS GPEPVLLDVS AIAGDRILLL DSYFTVVIFH GITIAQWRKA GYQHQEGHEV FAQLLQAPQE EADSIIKERF
701: PVPRLVVCDQ YGSQARFLLA KLNPSVTYDS DNPPPPGGDM IFTDDASFQV FMEHLQRLAV Q

Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)

001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H

Arabidopsis Description

At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.