Factsheet for HORVU5Hr1G068810.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G239200.1	Wheat	cytosol	97.51	97.51
TraesCS5A01G241100.1	Wheat	nucleus	96.33	96.33
EER96867	Sorghum	cytosol	88.58	88.58
Zm00001d005902_P001	Maize	cytosol	88.32	88.32
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	18.77	79.89
HORVU4Hr1G014740.3	Barley	cytosol	79.4	79.5
TraesCS5D01G247600.1	Wheat	cytosol, plastid	95.41	79.19
PGSC0003DMT400004550	Potato	cytosol	22.7	75.88
GSMUA_AchrUn_...	Banana	cytosol	53.54	75.0
Os09t0460200-00	Rice	plasma membrane	55.25	72.96
KRH66226	Soybean	cytosol, endoplasmic reticulum	73.23	72.75
KRH07342	Soybean	cytosol	72.97	72.68
VIT_15s0045g00540.t01	Wine grape	cytosol	74.15	72.34
Solyc01g081070.2.1	Tomato	cytosol, nucleus	72.31	72.12
AT2G21630.1	Thale cress	cytosol	63.78	63.86
CDY13800	Canola	cytosol	60.5	61.14
Bra031206.1-P	Field mustard	cytosol	59.84	60.72
HORVU4Hr1G041690.2	Barley	cytosol, nucleus	61.42	56.45
CDY59754	Canola	cytosol	59.84	48.15
HORVU5Hr1G094210.8	Barley	cytosol, plastid	37.4	38.0
HORVU3Hr1G044780.1	Barley	cytosol	16.14	16.73

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
InterPro:ADF-H/Gelsolin-like_dom_sf	GO:GO:0000139	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0006888
GO:GO:0008150	GO:GO:0008270	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016043
GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf	EnsemblPlantsGene:HORVU5Hr1G068810	EnsemblPlants:HORVU5Hr1G068810.2
InterPro:IPR029006	InterPro:IPR036465	UniProt:M0UG52	PFAM:PF00626	PFAM:PF04810	PFAM:PF04811
PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF9	SUPFAM:SSF53300	SUPFAM:SSF81811
SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf
InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	InterPro:Sec23_C	UniParc:UPI0002958147	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:519455939..519462920

Molecular Weight (calculated)

84419.3 Da

IEP (calculated)

5.169

GRAVY (calculated)

-0.036

Length

762 amino acids

Sequence
(BLAST)

001: MSEFLELEAL DGIRMPWNVF PGTKEDAVSC VVPVSAIYTP LKSIPDMPVV PYSPLRCRMC RSILNPFSRV DYNAKIWLCT FCFQRNQFPQ HYSSISENNL
101: PPELFPQYTT IEYISTAETG PVMPPVFIFV VDTCIIEEEI GYLKSALAQA TELLPDNSLI GFITFGTYVQ VHELGFGLLP KSYVFKGTKE VSKEQILEQM
201: CFFAGKQKPT TGVIAGTRDG LSSESISRFL VPASECEFVL NSVIEELQKD PWHIPADQRA SRCTGAALSV AASLLGVCVP GSGARIMAFV GGPSTEGPGS
301: IVSKSLAEPI RSHKDLDKDS APLHDKAVKF YDQIAKQLVH QGHVLDLFAC AVDQVGVAEM KVAIEKTGGI VVLAESFGHS VFKDSLLRIF QSADNGLGLS
401: FNGILEINCS KDLKIQGIIG PCTSLEKKSP LSADTVIGQG NTSAWKMCGL DKKTSLCFVY DISRKAGPDS GAQQTGEQLY LQFVTYYQHH EGQMRLRTTT
501: ISRTWASRSD SVQELIDGFD QEAAAAVVAR LVSFKMETEA DFDPIRWLDR ALIRLCTKFG DYQKETPSSF SLSPRLSIFP QFMFNLRRSQ FVQVFNNSPD
601: ETAYFRMMLE RENVGNAVAM IQPSLLSYSF QSGPMPVLLD ATAIAPDKIL LLDSYFSVVI FHGMNIAQWR NAGYQDQEGH EVFAQLLKAP HEEADTIMKE
701: RFPVPRLVVC DQYGSQARFL LAKLNPSVAY NSDNPAPGGD VIFTDDVSFE VFMDHLQRLA VQ

Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)

001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H

Arabidopsis Description

At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.