Factsheet for Os09t0460200-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	65.34	69.3
EER96867	Sorghum	cytosol	76.08	57.61
Zm00001d005902_P001	Maize	cytosol	75.56	57.22
Os08t0474700-01	Rice	plasma membrane	73.48	55.57
HORVU5Hr1G068810.2	Barley	cytosol	72.96	55.25
TraesCS5B01G239200.1	Wheat	cytosol	72.79	55.12
TraesCS5A01G241100.1	Wheat	nucleus	72.62	54.99
VIT_15s0045g00540.t01	Wine grape	cytosol	63.43	46.86
KRH66226	Soybean	cytosol, endoplasmic reticulum	62.05	46.68
Solyc01g081070.2.1	Tomato	cytosol, nucleus	61.35	46.34
KRH07342	Soybean	cytosol	61.18	46.14
TraesCS5D01G247600.1	Wheat	cytosol, plastid	73.14	45.97
AT2G21630.1	Thale cress	cytosol	55.46	42.05
CDY13800	Canola	cytosol	52.86	40.45
Bra031206.1-P	Field mustard	cytosol	51.47	39.55
CDY59754	Canola	cytosol	51.99	31.68
Os03t0742800-02	Rice	cytosol	33.28	25.36
Os11t0433500-01	Rice	cytosol, plasma membrane	9.88	16.24
Os01t0321700-01	Rice	cytosol, plastid	15.25	10.88
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	0.17	0.56
PGSC0003DMT400004550	Potato	cytosol	0.17	0.44

Protein Annotations

Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.50.410	UniProt:A0A0P0XNN0	ProteinID:BAT08473.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0008270	GO:GO:0016020
GO:GO:0030127	InterPro:IPR036465	EnsemblPlantsGene:Os09g0460200	EnsemblPlants:Os09t0460200-00	PFAM:PF04810	PFAM:PF04811
PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF9	SUPFAM:SSF53300	SUPFAM:SSF81995	SUPFAM:SSF82919
InterPro:Sec23	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	UniParc:UPI000393A89C	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

Similar to Transport protein. (Os09t0460200-00)

Coordinates

chr9:+:17404318..17412968

Molecular Weight (calculated)

62786.7 Da

IEP (calculated)

9.132

GRAVY (calculated)

-0.135

Length

577 amino acids

Sequence
(BLAST)

001: GWVRRSCGGA EAKRGDPKAA RRRRRLAGPW PPPAAAAGSR PPARRRRWPP SHAVERRRRR RALSGDGGGG GGGGGSPAPG PLLPPPRALA RPPPPLALVP
101: RFPDIPVLPY SPLRCRMCRS ILNPFSIVDY VAKIWVCPFC FQRNHFPQHY SSISESNLPA ELFPQYTTVE YISTAETGPV VPPVFMFVVD TCMIEEEIGY
201: LKSALAQVVE LLPDNSLVGF ITFGTYVQVH ELGFGLLPKS YVFKGTKEVT KDEMLDQMCF FAGKRKPTTG VIAGTRDGLS SESIARFLLP ASECEFVLNA
301: VIEELQKDPW PVPADQRASR CTGAALSVAA SLLGVCVPGS GARIMAFVGG PSTEGPGSIV SKSLLEPIRS HKDLDKDSAP LYDKAVKFYD QIAKQLVHQG
401: HVLDVFACAV DQVGVAEMKV AIEKTGGIVV LAESFGHSVF KDSLLRIFQS SDNDLGLSFN GILEINCSKD VKIQGIIGPC ASLEKKSPLS SDTVIGQGNT
501: SAWKMCGLDK KTSLCLVYDI AKKDGSNTIG QAASNQFYFQ FLTYYQHHEG QMRLRATTIS RRWVSGSDSV QATYRWL

Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)

001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H

Arabidopsis Description

At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.