Factsheet for Os03t0742800-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0200500-01
Os05t0520100-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G43670.1	Os01t0200500-01	AT3G16310.1	21798944
AT5G43670.1	Os05t0520100-00	AT3G16310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93475	Sorghum	cytosol	88.9	89.38
Zm00001d013301_P002	Maize	cytosol	88.77	89.24
TraesCS5D01G391900.1	Wheat	cytosol	86.26	86.84
TraesCS5B01G386700.1	Wheat	cytosol	86.0	86.57
TraesCS5A01G382500.2	Wheat	cytosol	85.87	86.44
Zm00001d033975_P002	Maize	cytosol	87.19	84.18
GSMUA_Achr4P11140_001	Banana	cytosol	29.99	82.55
HORVU5Hr1G094210.8	Barley	cytosol, plastid	70.01	70.67
Bra033691.1-P	Field mustard	cytosol	59.45	60.81
CDY22339	Canola	cytosol	59.05	60.41
KRG97332	Soybean	cytosol	57.86	60.0
Solyc03g005380.2.1	Tomato	cytosol, golgi, plasma membrane	61.03	59.38
CDX94717	Canola	cytosol	58.65	59.04
AT5G43670.1	Thale cress	cytosol	59.31	56.55
Os11t0433500-01	Rice	cytosol, plasma membrane	23.38	50.43
GSMUA_Achr4P11150_001	Banana	cytosol	24.04	46.43
Os08t0474700-01	Rice	plasma membrane	45.18	44.82
VIT_05s0020g04710.t01	Wine grape	plasma membrane	63.8	42.63
PGSC0003DMT400034845	Potato	cytosol	13.47	41.46
Os09t0460200-00	Rice	plasma membrane	25.36	33.28
Os01t0321700-01	Rice	cytosol, plastid	14.66	13.72

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
ProteinID:AAR87299.1	ProteinID:ABF98807.1	ProteinID:ABF98808.1	ProteinID:ABF98809.1	InterPro:ADF-H/Gelsolin-like_dom_sf	EMBL:AK069015
EMBL:AK102769	ProteinID:BAF13143.1	ProteinID:BAS86319.1	GO:GO:0000139	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810
GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0008270	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf
InterPro:IPR029006	InterPro:IPR036465	EnsemblPlantsGene:Os03g0742800	EnsemblPlants:Os03t0742800-02	PFAM:PF00626	PFAM:PF04810
PFAM:PF04811	PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF4	UniProt:Q75KX1
SUPFAM:SSF53300	SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23
InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	InterPro:Sec23_C	UniParc:UPI000022DF59
InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

Similar to Auxin-responsive protein IAA14 (Indoleacetic acid-induced protein 14) (SOLITARY-ROOT protein). (Os03t0742800-01);Similar to Auxin-responsive protein IAA14 (Indoleacetic acid-induced protein 14) (SOLITARY-ROOT protein). (Os03t0742800-02)

Coordinates

chr3:+:30476541..30482124

Molecular Weight (calculated)

83179.0 Da

IEP (calculated)

6.867

GRAVY (calculated)

0.008

Length

757 amino acids

Sequence
(BLAST)

001: MDFAELEAVE GLRWPWHAWP PTASAAASLV VPTSVLCTPL HPAAPDLLPL LPYAPLRCGG GGGGGGCGAA LNPFSRVHHA TARWACPFCG ASANPFPRLL
101: APDALPAELF PTHSSVEYAL PPDAAEAGGG PGPPSVVFVV DAATSGPELA ALKAEVLRVV QGLPEGVRVA LVSFAASVWV HDLGFEGCTR VVVMNGEREL
201: ESEKIQEFLG VRDARYNKLA MPRSTKVQRF LLPVSECEFN ITSAIEDLRS MSACPRGHRP LRATGAAIST AVALLEGCCS PNAGGRIMVF TSGPTTVGPG
301: LVVETDLGKA IRSHRDIFNG NAPLIDKARE FYKKVANRLT AHALVLDLFA CSLDQVGAAE LRYPIEVSGG LMVHTESFES EQFKACLRHI FNREGVGYLN
401: MNFNATIEIV TSREVKICGA LGPCISLHRK NSSVSDKEIG EGGTNYWKMS TVDSKTCIVF FFRVDCSHNT EPPTVFFIQF MTRYRHGDGS YRLRVTTVAR
501: RWAGPRSPEI AAGFDQEAAA AVMARLAVHR AETYHVRDVI RWLDKMLIRF TAKFGNYVPE DPSTFRLSTN FSLYPQFMYY LRRSQFIDVF NSSPDETAFF
601: RLMLNREGVV GSLIMIQPTL FQYSFDGPPI PVLLDVSSIS PDVILLFDSY FYIVIHYGSK IAQWRKLGYH KDPNHENLRK LLEAPEVDAE ALLVDRFPVP
701: KLIKCDQHGS QARFLLARLN PSVTQKTQLS DGSEVIFTDD VSLQVFIEHL QELAVQG

Best Arabidopsis Sequence Match ( AT5G43670.1 )
(BLAST)

001: MDFLELEAIE GLRWSWNSWP TTKSDCESLV VPLSIMYTPL MHFSELPTIP YDPLICSRCG AVLNPYARVD YQSRIWSCPF CFHKNLFPRS YSGITETNLP
101: AELFPTYSAV EYSPLPSRQS GSNTTTPTAA ASWSNGFNQG VRSMPSNSSF SSLASSTVGG GGGVISELGP AFVFVVDASM VEDELRAVRS DVLFVIEQLP
201: ENCLVALITF DSMVRVYDLG FSECSKVVVF HGERDLSPDQ IQQFLGLGYS KQFHHGKMSA IRKQSFLLPL VECEFNLTSA FEEIIPLVDV KPGHRPHRST
301: GAAISTALGL LEGCSVTTGS RIMVFTSGPA TRGPGIIVDS DLSNSIRTHR DIITGHVSYY DKSCGFYKKL AKRLCDSSVV LDVFACSLDQ VGAAELRYAV
401: EMSGGFLLLG ETFESEQFKK CLRHIFIRDA DGNLSMYFDV SLEVVTTKDM RICGALGPVV SLRQKNDIVS ETEIGEGGTY MWKTSTVTNK TCVSFFFHVS
501: NEQNRKPQPG SAFFIQFITR YRYGNGAMRK RVTTVARRWV AGKSPEISSS FDQETAASVM ARLAINRAEE CHARDVITWL DNGLIRFASR FGDYIQEDPS
601: SFRLTPNFSL YPQFMFYLRR SQFLDVFNNS PDETGFFRLM LNREGVVNSI IMIQPTLLRY SFDGPPVPVL LDIRSVTPDV ILLFDSYFYV VIHHGSKIAQ
701: WRKLEYHKDP SHETFRNLLE APEIDAAQLV TDRIPMPRIV RCDQHGSQAR FLLAKLNPSV TQKTDHTGGS DIVLTDDMSL QDFLEDLQSL AVKG

Arabidopsis Description

At5g43670 [Source:UniProtKB/TrEMBL;Acc:Q84WI4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.