Factsheet for Os11t0433500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004640_P001	Maize	cytosol, plastid	65.81	45.92
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	84.33	45.26
OQU83385	Sorghum	cytosol, plastid	97.44	43.13
Zm00001d049155_P004	Maize	plastid	97.15	43.11
TraesCS4D01G151400.1	Wheat	golgi	96.01	43.09
TraesCS4B01G163100.3	Wheat	plastid	96.01	43.09
TraesCS4A01G151800.3	Wheat	cytosol, plastid	95.44	42.62
GSMUA_Achr9P30270_001	Banana	plastid	84.05	41.84
GSMUA_Achr11P...	Banana	cytosol	25.36	40.64
HORVU4Hr1G041690.2	Barley	cytosol, nucleus	95.44	40.41
GSMUA_Achr8P33210_001	Banana	cytosol	82.62	39.56
GSMUA_Achr1P25630_001	Banana	plastid	82.62	39.3
CDY12077	Canola	cytosol	75.21	35.82
CDX90271	Canola	cytosol	75.21	35.77
Bra010748.1-P	Field mustard	cytosol	75.21	35.77
VIT_05s0062g00130.t01	Wine grape	cytosol	78.35	35.67
KRG97365	Soybean	cytosol, endoplasmic reticulum, nucleus	77.78	35.64
KRH31551	Soybean	endoplasmic reticulum	77.78	35.59
CDY12738	Canola	cytosol	74.36	35.46
PGSC0003DMT400080958	Potato	cytosol	75.78	34.82
CDY01197	Canola	cytosol	75.21	34.65
Solyc05g053830.2.1	Tomato	cytosol, nucleus, plastid	77.21	34.57
PGSC0003DMT400040714	Potato	cytosol	77.21	34.57
Bra030613.1-P	Field mustard	cytosol	75.5	34.55
CDX86574	Canola	cytosol	75.5	34.55
CDY15544	Canola	cytosol	75.5	34.55
Solyc09g092680.2.1	Tomato	cytosol	75.21	34.46
Bra032766.1-P	Field mustard	cytosol	75.5	34.33
CDY12241	Canola	cytosol	58.97	34.05
AT1G05520.1	Thale cress	cytosol	74.64	33.46
AT4G14160.1	Thale cress	cytosol	72.08	32.73
AT3G23660.2	Thale cress	cytosol	73.22	32.49
Os08t0474700-01	Rice	plasma membrane	67.52	31.06
Os03t0742800-02	Rice	cytosol	50.43	23.38
Os09t0460200-00	Rice	plasma membrane	16.24	9.88
Os01t0321700-01	Rice	cytosol, plastid	15.95	6.92
CDY64015	Canola	cytosol	2.28	5.76
Bra021056.1-P	Field mustard	cytosol, nucleus, plastid	2.28	3.59
Zm00001d004639_P001	Maize	plastid	2.56	2.17

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	InterPro:ADF-H/Gelsolin-like_dom_sf	ProteinID:BAF28161.1
ProteinID:BAT13830.1	GO:GO:0000139	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom
InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006	EnsemblPlantsGene:Os11g0433500	EnsemblPlants:Os11t0433500-01	PFAM:PF00626	PFAM:PF04815
PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF2	UniProt:Q0IT04	SUPFAM:SSF81811	SUPFAM:SSF81995
SUPFAM:SSF82754	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23_24_beta_S	InterPro:Sec23_C
UniParc:UPI0000DD9C0B	SEG:seg	:	:	:	:

Description

SEC23 proteinSimilar to Protein transport protein Sec23A (SEC23-related protein A). (Os11t0433500-01)

Coordinates

chr11:+:14018013..14022442

Molecular Weight (calculated)

39769.3 Da

IEP (calculated)

5.820

GRAVY (calculated)

-0.188

Length

351 amino acids

Sequence
(BLAST)

001: IKVQGIIGPC TSLEKKGALC ADTVVGQGNT TAWKMCGLDR NTSLTVFFDV SPSERSSQPG HQNPDLYIQF VTSYQHPEGQ MRIRVTTICR KWVDGSTNTE
101: ELVEGFDQET AAVVLARYIS LKMEMEEEFD ATRWLDRSLI RLCSRFGDYR KDDPSSFSLH SNFSLFPQFM FNLRRSQFVQ VFNNSPDETA YFRMLLNRES
201: ITNSVAMIQP SLISFSFDLP PSPVFLDVAS IAADRILLLD AYFSVVIFHG MTIAQWRNMG YQNQPEHQQF AQLLQAPHEE AQIIIKGRFP APRLVVCDQH
301: GSQARFLLAK LNPSATYNSA HDVPPGSDII FTDDVSFQVF CEHLQRLAVQ S

Best Arabidopsis Sequence Match ( AT3G23660.1 )
(BLAST)

001: MAETANTDLE GIDGVRMTWN VWPHSKAEAS KCVIPLAACI SPIRRHADIP TLPYAPLRCR TCSAALNAYA QVDFTAKLWI CPFCYQRNHF PPHYHVISET
101: NLPGELYPQY TTVEYTLPPP VANGEGLVDP PVFVFVLDTC MIEEELDFAK SALKQAIGLL PENALVGFVS FGTQAHVHEL GFSEMSKVFV FKGDKEISKD
201: QILDQLGLGG SSRRGGSKGP QNGFPSSGLN RFLLPASECE FTLNSLLDEL QSDQWPVKPG HRSQRCTGVA LSVAAGLLGA CLPGTGARIV ALIGGPCTEG
301: PGTIVSKDLS DPVRSHKDLD KDAAPYYKKA VKFYDSIAKQ LVTQGHVLDL FASALDQVGV AEMKVAVERT GGLVVLSESF GHSVFKDSFK RVFEDGDQAL
401: GLCFNGTLEI CCSQDIKIQG AIGPCSSLEK KGASVADTVI GEGNTSAWRL CGLDKTTCLT IFFDISSSGS NTPGAANPQF YLQFLTSYQN PEGQTLLRVT
501: TVCRQWIDSA VSSEELVQGF DQETAAVVMA RLASLKMESE EGFDATRWLD RNLIRLCSKF GDYRKDDPAS FTLNPYFSLF PQFIFNLRRS QFVQVFNNSP
601: DETAYFCMLL NRENISNATV MIQPSLTTYS FNSPAEPALL DVASIAADRI LLLDAYFSVV VFHGMTIAQW RNMGYHHQPE HQAFAELLQA PQEDSQMIVR
701: ERFPVPRLVV CDQHGSQARF LLAKLNPSAT YNNANEMSTG SDVIFTDDVS LQVFFEHLQK LVVQS

Arabidopsis Description

Sec23/Sec24 protein transport family protein [Source:UniProtKB/TrEMBL;Acc:F4J462]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.