Factsheet for Solyc09g092680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080958	Potato	cytosol	97.78	98.04
Solyc05g053830.2.1	Tomato	cytosol, nucleus, plastid	85.77	83.8
KRG97365	Soybean	cytosol, endoplasmic reticulum, nucleus	77.68	77.68
KRH31551	Soybean	endoplasmic reticulum	77.55	77.44
VIT_05s0062g00130.t01	Wine grape	cytosol	77.28	76.78
Os11t0433500-01	Rice	cytosol, plasma membrane	34.46	75.21
Bra030613.1-P	Field mustard	cytosol	73.76	73.66
CDX86574	Canola	cytosol	73.76	73.66
CDY15544	Canola	cytosol	73.76	73.66
Bra032766.1-P	Field mustard	cytosol	73.89	73.32
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	62.53	73.24
CDY12738	Canola	cytosol	69.97	72.83
CDX90271	Canola	cytosol	70.1	72.76
CDY12077	Canola	cytosol	69.97	72.73
Bra010748.1-P	Field mustard	cytosol	69.97	72.63
AT1G05520.1	Thale cress	cytosol	72.98	71.39
AT4G14160.1	Thale cress	cytosol	71.8	71.15
AT3G23660.2	Thale cress	cytosol	73.11	70.8
CDY01197	Canola	cytosol	69.97	70.34
GSMUA_Achr9P30270_001	Banana	plastid	64.49	70.07
GSMUA_Achr8P33210_001	Banana	cytosol	66.71	69.71
GSMUA_Achr1P25630_001	Banana	plastid	66.71	69.24
Zm00001d049155_P004	Maize	plastid	69.71	67.51
TraesCS4B01G163100.3	Wheat	plastid	68.8	67.39
TraesCS4D01G151400.1	Wheat	golgi	68.8	67.39
OQU83385	Sorghum	cytosol, plastid	69.45	67.09
TraesCS4A01G151800.3	Wheat	cytosol, plastid	68.54	66.79
HORVU4Hr1G041690.2	Barley	cytosol, nucleus	68.41	63.21
GSMUA_Achr11P...	Banana	cytosol	18.02	63.01
Solyc01g081070.2.1	Tomato	cytosol, nucleus	61.49	61.65
CDY12241	Canola	cytosol	45.95	57.89
Zm00001d004639_P001	Maize	plastid	30.16	55.66
Zm00001d004640_P001	Maize	cytosol, plastid	35.25	53.68
Solyc03g005380.2.1	Tomato	cytosol, golgi, plasma membrane	44.13	43.44
Solyc11g056380.1.1	Tomato	cytosol	4.18	20.91
Solyc09g055810.1.1	Tomato	cytosol	1.7	16.46
Solyc02g021380.1.1	Tomato	plastid	1.57	14.81
Solyc01g080850.2.1	Tomato	plastid	15.8	13.83

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
InterPro:ADF-H/Gelsolin-like_dom_sf	GO:GO:0000139	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0006888
GO:GO:0008150	GO:GO:0008270	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016043
GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006	InterPro:IPR036465
UniProt:K4CWT9	PFAM:PF00626	PFAM:PF04810	PFAM:PF04811	PFAM:PF04815	PFAM:PF08033
PANTHER:PTHR11141	PANTHER:PTHR11141:SF2	SUPFAM:SSF53300	SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754
SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S
InterPro:Sec23_C	EnsemblPlantsGene:Solyc09g092680.2	EnsemblPlants:Solyc09g092680.2.1	UniParc:UPI000276BD7E	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

No Description!

Coordinates

chr9:-:71648646..71655712

Molecular Weight (calculated)

84334.0 Da

IEP (calculated)

5.825

GRAVY (calculated)

-0.032

Length

766 amino acids

Sequence
(BLAST)

001: MATEMAQTEP EGIDGVRMTW NSWPRTKVEA SKCIIPIASS IQLLRPFPDL PTLPYAPLRC KTCSSILNPF CRVDFQALIW ICPFCFQRNH FPQHYSGISE
101: TNVPAELYPQ FTTIQYAIQN PGGHNSPPVY LFVLDTCMLD EELEFAKSAL KRVIGLLPDY AMVGFISYGT QVQVHELGFS DMSKVFVFQG SKDLSKDQVL
201: DQLGLGSISG RKGGGGGVGV NGGPNHGLTR FLLPASECEY TLDSLLDELS TDQWPVTPGN RASRCTGVAL SVATGLLGAC LAGAGARIVA LVGGPCTEGP
301: GAIVSKDLSE PVRSHKDLHK DAAPFFKKAV HFYEELAKQL VSHGHILDVF ASALDQVGVA EMKVAIEKTG GQVVLAESFG HSVFKDSFKR VFEVGEQSLG
401: LCFNATLEIN CSKDIKIQGI IGPCTSLEKK GPAVSSTVTG EGNTTAWKLC GLDKNTCLTV FYDVSSSEKS DPSGNINPQL YIQFLTSYQS PDGQTKLRVT
501: TITRRWLDAV VGTEDLVQGF DQEAAAVVMA RLASYKMELE EDFDPTRWLD RNLIRLCSKF GEYRKDDPAS FTLNPCFSLL PQFMFHLRRS QFLQVFNNSP
601: DETAYFRMLL YRESISSAVV MIQPTLMAFS FNTLPSPALL DVASIAADRI LLLDSYFSVV IFHGMTIAQW RNLGYQNQPE HQAFAHLLQV PHDEAQALIQ
701: ERFPVPRLVV CDQHGSQARF LLAKLNPSAT YNNANDMAAG SDVIFTDDVS LQVFFQHLQR LAVQSS

Best Arabidopsis Sequence Match ( AT3G23660.1 )
(BLAST)

001: MAETANTDLE GIDGVRMTWN VWPHSKAEAS KCVIPLAACI SPIRRHADIP TLPYAPLRCR TCSAALNAYA QVDFTAKLWI CPFCYQRNHF PPHYHVISET
101: NLPGELYPQY TTVEYTLPPP VANGEGLVDP PVFVFVLDTC MIEEELDFAK SALKQAIGLL PENALVGFVS FGTQAHVHEL GFSEMSKVFV FKGDKEISKD
201: QILDQLGLGG SSRRGGSKGP QNGFPSSGLN RFLLPASECE FTLNSLLDEL QSDQWPVKPG HRSQRCTGVA LSVAAGLLGA CLPGTGARIV ALIGGPCTEG
301: PGTIVSKDLS DPVRSHKDLD KDAAPYYKKA VKFYDSIAKQ LVTQGHVLDL FASALDQVGV AEMKVAVERT GGLVVLSESF GHSVFKDSFK RVFEDGDQAL
401: GLCFNGTLEI CCSQDIKIQG AIGPCSSLEK KGASVADTVI GEGNTSAWRL CGLDKTTCLT IFFDISSSGS NTPGAANPQF YLQFLTSYQN PEGQTLLRVT
501: TVCRQWIDSA VSSEELVQGF DQETAAVVMA RLASLKMESE EGFDATRWLD RNLIRLCSKF GDYRKDDPAS FTLNPYFSLF PQFIFNLRRS QFVQVFNNSP
601: DETAYFCMLL NRENISNATV MIQPSLTTYS FNSPAEPALL DVASIAADRI LLLDAYFSVV VFHGMTIAQW RNMGYHHQPE HQAFAELLQA PQEDSQMIVR
701: ERFPVPRLVV CDQHGSQARF LLAKLNPSAT YNNANEMSTG SDVIFTDDVS LQVFFEHLQK LVVQS

Arabidopsis Description

Sec23/Sec24 protein transport family protein [Source:UniProtKB/TrEMBL;Acc:F4J462]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.