Factsheet for HORVU4Hr1G041690.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G151400.1	Wheat	golgi	90.95	96.42
TraesCS4B01G163100.3	Wheat	plastid	90.95	96.42
TraesCS4A01G151800.3	Wheat	cytosol, plastid	90.71	95.67
Os11t0433500-01	Rice	cytosol, plasma membrane	40.41	95.44
OQU83385	Sorghum	cytosol, plastid	85.16	89.03
Zm00001d049155_P004	Maize	plastid	84.56	88.62
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	62.73	79.51
Zm00001d004639_P001	Maize	plastid	38.96	77.83
GSMUA_Achr1P25630_001	Banana	plastid	68.52	76.96
GSMUA_Achr9P30270_001	Banana	plastid	64.9	76.31
GSMUA_Achr8P33210_001	Banana	cytosol	67.43	76.26
VIT_05s0062g00130.t01	Wine grape	cytosol	68.52	73.67
CDX86574	Canola	cytosol	66.59	71.97
CDY15544	Canola	cytosol	66.47	71.84
Bra030613.1-P	Field mustard	cytosol	66.47	71.84
KRG97365	Soybean	cytosol, endoplasmic reticulum, nucleus	66.1	71.54
KRH31551	Soybean	endoplasmic reticulum	66.1	71.45
CDY12077	Canola	cytosol	63.33	71.23
CDX90271	Canola	cytosol	62.97	70.73
Bra010748.1-P	Field mustard	cytosol	62.97	70.73
Bra032766.1-P	Field mustard	cytosol	65.74	70.6
CDY12738	Canola	cytosol	62.12	69.97
PGSC0003DMT400040714	Potato	cytosol	65.86	69.64
GSMUA_Achr11P...	Banana	cytosol	18.34	69.41
Solyc05g053830.2.1	Tomato	cytosol, nucleus, plastid	65.62	69.39
AT4G14160.1	Thale cress	cytosol	64.54	69.21
PGSC0003DMT400080958	Potato	cytosol	63.33	68.72
AT1G05520.1	Thale cress	cytosol	64.9	68.71
Solyc09g092680.2.1	Tomato	cytosol	63.21	68.41
CDY01197	Canola	cytosol	62.73	68.24
AT3G23660.2	Thale cress	cytosol	64.78	67.89
HORVU4Hr1G014740.3	Barley	cytosol	57.18	62.29
Zm00001d004640_P001	Maize	cytosol, plastid	37.52	61.83
HORVU5Hr1G068810.2	Barley	cytosol	56.45	61.42
CDY12241	Canola	cytosol	41.74	56.91
CDY64015	Canola	cytosol	6.63	39.57
HORVU5Hr1G094210.8	Barley	cytosol, plastid	34.74	38.4
Bra021056.1-P	Field mustard	cytosol, nucleus, plastid	8.69	32.29
HORVU3Hr1G044780.1	Barley	cytosol	15.44	17.41

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
UniProt:A0A287NVF2	InterPro:ADF-H/Gelsolin-like_dom_sf	ncoils:Coil	GO:GO:0000139	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810
GO:GO:0006886	GO:GO:0006888	GO:GO:0008150	GO:GO:0008270	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0016043	GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf
EnsemblPlantsGene:HORVU4Hr1G041690	EnsemblPlants:HORVU4Hr1G041690.2	InterPro:IPR029006	InterPro:IPR036465	PFAM:PF00626	PFAM:PF04810
PFAM:PF04811	PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF2	SUPFAM:SSF53300
SUPFAM:SSF81811	SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom
InterPro:Sec23/24_helical_dom_sf	InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	InterPro:Sec23_C	UniParc:UPI000B45F93D	InterPro:Znf_Sec23_Sec24
InterPro:Znf_Sec23_Sec24_sf	SEG:seg	InterPro:vWFA_dom_sf	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:328593492..328610152

Molecular Weight (calculated)

91349.2 Da

IEP (calculated)

6.121

GRAVY (calculated)

-0.108

Length

829 amino acids

Sequence
(BLAST)

001: KNENEDKRTE RTEQETTRRR SSPSPLLSPL RSTRSPLLPD SCSPRSIMAA DPSAAAAPAD PDGPDAVRFT WNAWPRSKVE ASRCVVPLAA AISPVRSPES
101: LASPPLPYPP LRCKPPCSAL LNPFARVDFA AKIWICPLCF SRNHFPPHYA GISENNVPAE LFTQCSTVEY LVAAPPGSPA PLPPVFLFVI DTCVIEEELE
201: YVKLSMRKAV ALLPEHALVG LVTFGTQVHL HELGFSELSK IYVFRGSKEI SKEQILDQLG LSVGGRPGFP KMTQQPGVQQ VNVMHPLATT GVNRFLLPVS
301: ECECTLSTLL DELQPDQWPV EAGNRAIRCT GVALNVAAGL LGACLPGTGA RIIALLGGPC TEGPGVIVSK DLSEPVRSHK DLDKDAAPHF QKAVKFYDGL
401: AKQLVSQGHV LDVFASALDQ VGLAEMKLAI ERTCGLVVLS ESFGHSVFKD SFKRIFEGGE HSLGLSFNGT FEINCSKDIK VQGVIGPCTS LEKKGALCAD
501: TIIGQGSTTA WKMCGLDRNT SLTVFFDVSP SERSGQPGHQ NPDLYIQFVT SYQHPEGQMR IRVTTVSRKW VDGSTNTEEL VEGFDQETAA VVLARYISLK
601: MEIEEEFDAT RWLDRSLIRL CSRFGDYRKD DPSSFSLHSN FSLFPQFMFN LRRSQFVQVF NNSPDETAYF RMLLNRESIT NSVAMIQPSL ISFSFDSPPS
701: PVFLDVASIA VDRILLLDAY FSVVIFHGMT IAQWRNMCYQ NQPEHQQFAQ LLQAPQEEAQ VIINGRFPVP RLVVCDQHGS QARFLLAKLN PSATYNSAHD
801: VPPGSDIIFT DDVSFQVFCE HLQRLSVQS

Best Arabidopsis Sequence Match ( AT3G23660.1 )
(BLAST)

001: MAETANTDLE GIDGVRMTWN VWPHSKAEAS KCVIPLAACI SPIRRHADIP TLPYAPLRCR TCSAALNAYA QVDFTAKLWI CPFCYQRNHF PPHYHVISET
101: NLPGELYPQY TTVEYTLPPP VANGEGLVDP PVFVFVLDTC MIEEELDFAK SALKQAIGLL PENALVGFVS FGTQAHVHEL GFSEMSKVFV FKGDKEISKD
201: QILDQLGLGG SSRRGGSKGP QNGFPSSGLN RFLLPASECE FTLNSLLDEL QSDQWPVKPG HRSQRCTGVA LSVAAGLLGA CLPGTGARIV ALIGGPCTEG
301: PGTIVSKDLS DPVRSHKDLD KDAAPYYKKA VKFYDSIAKQ LVTQGHVLDL FASALDQVGV AEMKVAVERT GGLVVLSESF GHSVFKDSFK RVFEDGDQAL
401: GLCFNGTLEI CCSQDIKIQG AIGPCSSLEK KGASVADTVI GEGNTSAWRL CGLDKTTCLT IFFDISSSGS NTPGAANPQF YLQFLTSYQN PEGQTLLRVT
501: TVCRQWIDSA VSSEELVQGF DQETAAVVMA RLASLKMESE EGFDATRWLD RNLIRLCSKF GDYRKDDPAS FTLNPYFSLF PQFIFNLRRS QFVQVFNNSP
601: DETAYFCMLL NRENISNATV MIQPSLTTYS FNSPAEPALL DVASIAADRI LLLDAYFSVV VFHGMTIAQW RNMGYHHQPE HQAFAELLQA PQEDSQMIVR
701: ERFPVPRLVV CDQHGSQARF LLAKLNPSAT YNNANEMSTG SDVIFTDDVS LQVFFEHLQK LVVQS

Arabidopsis Description

Sec23/Sec24 protein transport family protein [Source:UniProtKB/TrEMBL;Acc:F4J462]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.