Factsheet for Zm00001d005902_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96867	Sorghum	cytosol	98.29	98.29
TraesCS5B01G239200.1	Wheat	cytosol	88.71	88.71
HORVU5Hr1G068810.2	Barley	cytosol	88.32	88.32
TraesCS5A01G241100.1	Wheat	nucleus	88.06	88.06
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	19.16	81.56
GSMUA_AchrUn_...	Banana	cytosol	55.77	78.12
PGSC0003DMT400004550	Potato	cytosol	23.36	78.07
Os09t0460200-00	Rice	plasma membrane	57.22	75.56
KRH07342	Soybean	cytosol	75.85	75.56
KRH66226	Soybean	cytosol, endoplasmic reticulum	75.98	75.49
VIT_15s0045g00540.t01	Wine grape	cytosol	77.3	75.42
Solyc01g081070.2.1	Tomato	cytosol, nucleus	74.93	74.74
TraesCS5D01G247600.1	Wheat	cytosol, plastid	87.53	72.66
AT2G21630.1	Thale cress	cytosol	66.01	66.1
CDY13800	Canola	cytosol	62.73	63.4
Bra031206.1-P	Field mustard	cytosol	61.94	62.85
Zm00001d049155_P004	Maize	plastid	64.04	61.69
Zm00001d004640_P001	Maize	cytosol, plastid	33.46	50.7
Zm00001d004639_P001	Maize	plastid	27.56	50.6
CDY59754	Canola	cytosol	62.2	50.05
Zm00001d013301_P002	Maize	cytosol	44.36	44.89
Zm00001d033975_P002	Maize	cytosol	44.36	43.11
Zm00001d009150_P002	Maize	plastid	17.45	15.36

Protein Annotations

Gene3D:1.20.120.730	Gene3D:2.30.30.380	Gene3D:2.60.40.1670	MapMan:22.4.1.3.1	Gene3D:3.40.20.10	Gene3D:3.40.50.410
UniProt:A0A1D6ERI0	InterPro:ADF-H/Gelsolin-like_dom_sf	GO:GO:0000139	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886
GO:GO:0006888	GO:GO:0008150	GO:GO:0008270	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020
GO:GO:0016043	GO:GO:0030127	GO:GO:0090114	InterPro:Gelsolin-like_dom	InterPro:Gelsolin-like_dom_sf	InterPro:IPR029006
InterPro:IPR036465	ProteinID:ONM22343.1	ProteinID:ONM22344.1	PFAM:PF00626	PFAM:PF04810	PFAM:PF04811
PFAM:PF04815	PFAM:PF08033	PANTHER:PTHR11141	PANTHER:PTHR11141:SF9	SUPFAM:SSF53300	SUPFAM:SSF81811
SUPFAM:SSF81995	SUPFAM:SSF82754	SUPFAM:SSF82919	InterPro:Sec23	InterPro:Sec23/24_helical_dom	InterPro:Sec23/24_helical_dom_sf
InterPro:Sec23/24_trunk_dom	InterPro:Sec23_24_beta_S	InterPro:Sec23_C	UniParc:UPI0008434831	EnsemblPlantsGene:Zm00001d005902	EnsemblPlants:Zm00001d005902_P001
EnsemblPlants:Zm00001d005902_T001	InterPro:Znf_Sec23_Sec24	InterPro:Znf_Sec23_Sec24_sf	SEG:seg	InterPro:vWFA_dom_sf	:

Description

Sec23/Sec24 protein transport family protein

Coordinates

chr2:+:192256971..192280550

Molecular Weight (calculated)

84667.6 Da

IEP (calculated)

5.031

GRAVY (calculated)

-0.008

Length

762 amino acids

Sequence
(BLAST)

001: MSEFLDLELQ DGIRMPWNVI PGTKQETVNC VIPVSAIYTP LKPISDIPVL PYSPLRCRMC RSILNPFSIV DYVAKIWVCS FCFQRNQFPQ HYSSISENNL
101: PAELFPQYTT VEYISSTETG PIVPPVFIFV VDTCMIEEEI GYLKSALAQA VELLPDNSLV GFITFGTYVQ VHELGFGLLP KSYVFKGTKE VTKEQILEQM
201: CFFAGKKMPT TGVIAGTRDG LSSESISRFL LPASECEFVL NSVIEEIQKD PWPVPADQRA SRCTGAALSV AANLLGVCVP GSGARIMAFV GGPSTEGPGP
301: IVSKSLSEPI RSHKDLDKDS APLYDKAVKF YDQIAKQLVH QGHVLDLFAC AVDQVGVAEM KVAIEKTGGI VVLAESFGHS VFKDSLLRIF QSTDDNLGLS
401: FNGILEINCS KDVKVQGIIG PCSSLEKKSP LSSDTVIGQG NTSAWKMCGL DRKTSLCLVY DIAKKDGPDS IAQSANNQFY FQFLTYYQHN EGQMRLRSTT
501: ISRRWVSGDN HVEELVAGFD QEAAAAVMAR LVSFKMETEV DFDPVRWLDR ALIRLCSKFG DYQKETPSSF SLSPRLSIFP QFIFNLRRSQ FVQVFNNSPD
601: ETAYFRMMLD RENVTNTVVM IQPSLISYSF QSGPEPVLLD ATAIASDKIL LLDSYFTVVI FHGVTIAQWR NAGYQDQEGH EVFAQLLKAP HEEANLIIKE
701: RFPVPRLVVC DQYGSQARFL LAKLNPSVTY NSDNPSPGGD VIFTDDVSFQ VFMDHLQRLA VQ

Best Arabidopsis Sequence Match ( AT2G21630.1 )
(BLAST)

001: MAEFGELEAQ DGVRMPWNII PVATKKEQSI DSEVPVSAIY TPLKPLRSQS LLLPYSPLRC RTCRSVLNPY SVVDFSACNW GCPFCFNRNP FPLNYSSVAD
101: NNLPPELFPH STTVEYLCDS FSSPSPPVFL FVVDTCLISE ELDFLKSSLF QALDLLPDTS ILGLITFDSL VRVYELGFPH CTKSYFFHGN KDCTKDQLLD
201: QLSFFVKNPK PSSGVIAGAR DGLSSDDIAR FLLPASDCHF TLHSVLEELG NSPWPVAADH RPARCTGVAL RIAASLLGAC FPGSAARIMA FIGGPSTQGP
301: GAIVSRELSD PIRSHKDIDK DSAMYYHKAV EFYEMLAKQL VHQGHVLDVF ASSVDQVGIA ELKVAVEQTG GFVVLAESFG HSVFRDSLKR VCQSGENDLG
401: LSSCGIFEIN CSKDIKVQGI IGPCASLEKK GPLCSDTAIG QGHTSAWKMC GLDNNTSICL VFEIAKIDTA DVVLQSQSNQ FYFQFLTYYQ HSNGQTRLRV
501: TTLSRRWVMG TESLQELSNG FDQEAAAVVM ARLISSKMET QPEFNPQRWV DKALINLCTW FGDYQKGNPS SFSLSSQLSI FPQFVFHLRR SQFVQVFNNS
601: PDETAYFRMI LYRENVSNSV VMIQPSLISF SFHSPPEPIL LDVASIAADR ILLLDSYFTL VIFHGSTIAQ WRKAGYHNQP EHQAFGHLLQ SPRDYADTIM
701: SERFPTPRLV ICDQYGSQAR FLLAKLNPCD GDAHFSGQSN VFTDDVSLSV FLDHLRRLIV H

Arabidopsis Description

At2g21630 [Source:UniProtKB/TrEMBL;Acc:Q9SIJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.