Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G307800.1 | Wheat | cytosol | 91.62 | 98.06 |
| TraesCS4A01G230100.1 | Wheat | cytosol | 97.49 | 91.48 |
| HORVU4Hr1G014740.3 | Barley | cytosol | 95.95 | 90.28 |
| Os08t0474700-01 | Rice | plasma membrane | 86.17 | 80.86 |
| OQU80636 | Sorghum | cytosol | 85.89 | 80.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.73 | 73.35 |
| EER99932 | Sorghum | cytosol | 35.61 | 70.44 |
| VIT_15s0045g00540.t01 | Wine grape | cytosol | 75.42 | 69.14 |
| Solyc01g081070.2.1 | Tomato | cytosol, nucleus | 71.79 | 67.28 |
| KRH66226 | Soybean | cytosol, endoplasmic reticulum | 72.07 | 67.28 |
| KRH07342 | Soybean | cytosol | 71.51 | 66.93 |
| AT2G21630.1 | Thale cress | cytosol | 65.78 | 61.89 |
| TraesCS5D01G247600.1 | Wheat | cytosol, plastid | 78.07 | 60.89 |
| CDY13800 | Canola | cytosol | 61.73 | 58.62 |
| PGSC0003DMT400004550 | Potato | cytosol | 18.58 | 58.33 |
| Bra031206.1-P | Field mustard | cytosol | 60.61 | 57.79 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 14.25 | 56.98 |
| TraesCS4D01G151400.1 | Wheat | golgi | 59.64 | 54.6 |
| CDY59754 | Canola | cytosol | 60.34 | 45.62 |
| TraesCS5D01G391900.1 | Wheat | cytosol | 42.88 | 40.82 |
| TraesCS3D01G198500.1 | Wheat | plastid | 15.92 | 13.48 |
Protein Annotations
| Gene3D:1.20.120.730 | Gene3D:2.30.30.380 | Gene3D:2.60.40.1670 | MapMan:22.4.1.3.1 | Gene3D:3.40.20.10 | Gene3D:3.40.50.410 |
| InterPro:ADF-H/Gelsolin-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006888 | GO:GO:0008150 | GO:GO:0008270 |
| GO:GO:0016020 | GO:GO:0030127 | InterPro:Gelsolin-like_dom | InterPro:Gelsolin-like_dom_sf | InterPro:IPR029006 | InterPro:IPR036465 |
| PFAM:PF00626 | PFAM:PF04810 | PFAM:PF04811 | PFAM:PF04815 | PFAM:PF08033 | PANTHER:PTHR11141 |
| PANTHER:PTHR11141:SF2 | SUPFAM:SSF53300 | SUPFAM:SSF81811 | SUPFAM:SSF81995 | SUPFAM:SSF82754 | SUPFAM:SSF82919 |
| InterPro:Sec23 | InterPro:Sec23/24_helical_dom | InterPro:Sec23/24_helical_dom_sf | InterPro:Sec23/24_trunk_dom | InterPro:Sec23_24_beta_S | EnsemblPlantsGene:TraesCS4D01G083800 |
| EnsemblPlants:TraesCS4D01G083800.1 | InterPro:Znf_Sec23_Sec24 | InterPro:Znf_Sec23_Sec24_sf | SEG:seg | InterPro:vWFA_dom_sf | : |
Description
No Description!
Coordinates
chr4D:-:57478943..57488723
Molecular Weight (calculated)
78945.9 Da
IEP (calculated)
5.803
GRAVY (calculated)
0.011
Length
716 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEFLELEAR DGVRMTWNVI PGTKQDAASC VVPVSAIYTP LNPNPAIPVL PYAPLRCRIC RSILNPFSVA DFGSKMWLCP FCFQRNHFPQ QYSAVSQSNL
101: PTELYPECCT VEYMATAETG PVSPPVFLFV VDTCMIEEEI GYLKSALAQA VELLPDQSLV GFITFGTYVQ VHELGFGLLP KSHVFKGTKE IKKDQILEQM
201: GFLTGKTKPT TGVITGARDG VSAESIARFL LPASECEFIL NSLIEELQKD PWPVSADQRA SRCTGAALSV AASLLGICVP GSGGRIMAFI GGPSTEGPGS
301: IISKPLSDPI RSHKDLDKGS APLYNKAVKF YEEIGNQLVH QGHVLDLFAC ALDQVGVAEM KVAVERTGGI VVLAESFGHS VFKDSLRHIF QSSDSDLGLS
401: FNGIFEINCS KDVKIQGIIG PCTSLEKKGP LSSDTVIGQG NTSAWKMCGL DRKTSLCIVF DMAKKDAPDA IGQSQNNLFY FQFLTYYQHH DGQMRLRSTT
501: ISRRWVAGSG SVQELITGFD QEAAAAVMAR LVSFKMEAEV DFDPVRWLDR ALISLCSKFG DYQKEAPSSF SLSPRLSIFP QFIFNLRRSQ FIQVFNNSPD
601: ETAYFRMMLN RENVANAVVM IQPSLISYSF QSGPEPVLLD VSAIAGDRIL LLDSYFTVVI FHGITIAQWR KAGYQHQEGH EVFAQLLQAP QEEADSIIKE
701: RFPVPRVLRL DSCWQS
101: PTELYPECCT VEYMATAETG PVSPPVFLFV VDTCMIEEEI GYLKSALAQA VELLPDQSLV GFITFGTYVQ VHELGFGLLP KSHVFKGTKE IKKDQILEQM
201: GFLTGKTKPT TGVITGARDG VSAESIARFL LPASECEFIL NSLIEELQKD PWPVSADQRA SRCTGAALSV AASLLGICVP GSGGRIMAFI GGPSTEGPGS
301: IISKPLSDPI RSHKDLDKGS APLYNKAVKF YEEIGNQLVH QGHVLDLFAC ALDQVGVAEM KVAVERTGGI VVLAESFGHS VFKDSLRHIF QSSDSDLGLS
401: FNGIFEINCS KDVKIQGIIG PCTSLEKKGP LSSDTVIGQG NTSAWKMCGL DRKTSLCIVF DMAKKDAPDA IGQSQNNLFY FQFLTYYQHH DGQMRLRSTT
501: ISRRWVAGSG SVQELITGFD QEAAAAVMAR LVSFKMEAEV DFDPVRWLDR ALISLCSKFG DYQKEAPSSF SLSPRLSIFP QFIFNLRRSQ FIQVFNNSPD
601: ETAYFRMMLN RENVANAVVM IQPSLISYSF QSGPEPVLLD VSAIAGDRIL LLDSYFTVVI FHGITIAQWR KAGYQHQEGH EVFAQLLQAP QEEADSIIKE
701: RFPVPRVLRL DSCWQS
001: MSEMASMDPE GIDGVRMTWN VWPRTKVEAS KCVIPVAACI SPIRYHRDIP SVEYAPLRCR ICTAALNPFA RVDFLAKIWI CPICFQRNHF PPHYHVMSET
101: NVPCELYPQY TTVEYTLPNP SQPTGVGNFD QTGAVSGQPS PSVFVFVLDT CMIEEEFGYA KSALKQAIGL LPENALVGFV SFGTQAHVHE LGFSDLTKVY
201: VFRGDKEISK DQVLEQLGLG ASGRRNPVGG FPMGRDNSAN FGYSGVNRFL LPASDCEFTI DLLLEELQTD QWPVQAGRRQ SRCTGVAISV ATGLLGACFP
301: GTGARIVALI GGPCSEGPGT IVSKDLSEPL RSHKDLDKDA APFYKKAEKF YDALANQLVN QGHVLDLFAS ALDQVGVAEM KAAVERTGGL VVLSESFGHS
401: VFKDSFKRVF EDGEESLGLC FNGTLEICCS KDIKIQGIIG PCASLQKKGP SVADTVIGEG NTTQWKMCGL DKRTCLTVFF DLSSSDQSSA PGGVNNQLYL
501: QFMTSYQNSK GKTLQRVTTV TRQWVDTGLS TEELVQGFDQ ETAAVVVARL ASLKMETEEG FDATRWLDRN LIRLCSKFGD YRKDDPASFT LNPNFSLFPQ
601: FTFNLRRSQF VQVFNNSPDE TAYNRMLLNR ENISNAAVMI QPSLTTYSFN SLPQPALLDV ASIGADRILL LDSYISVVVF HGMTIAQWRN LGYQNQPEHQ
701: AFAQLLEAPQ EDAQMIIRDR FPVPRLVVCD QHGSQARFLL AKLNPSATYN NASEMNAGSD IIFTDDVSLQ VFFQHLQKLA VQS
101: NVPCELYPQY TTVEYTLPNP SQPTGVGNFD QTGAVSGQPS PSVFVFVLDT CMIEEEFGYA KSALKQAIGL LPENALVGFV SFGTQAHVHE LGFSDLTKVY
201: VFRGDKEISK DQVLEQLGLG ASGRRNPVGG FPMGRDNSAN FGYSGVNRFL LPASDCEFTI DLLLEELQTD QWPVQAGRRQ SRCTGVAISV ATGLLGACFP
301: GTGARIVALI GGPCSEGPGT IVSKDLSEPL RSHKDLDKDA APFYKKAEKF YDALANQLVN QGHVLDLFAS ALDQVGVAEM KAAVERTGGL VVLSESFGHS
401: VFKDSFKRVF EDGEESLGLC FNGTLEICCS KDIKIQGIIG PCASLQKKGP SVADTVIGEG NTTQWKMCGL DKRTCLTVFF DLSSSDQSSA PGGVNNQLYL
501: QFMTSYQNSK GKTLQRVTTV TRQWVDTGLS TEELVQGFDQ ETAAVVVARL ASLKMETEEG FDATRWLDRN LIRLCSKFGD YRKDDPASFT LNPNFSLFPQ
601: FTFNLRRSQF VQVFNNSPDE TAYNRMLLNR ENISNAAVMI QPSLTTYSFN SLPQPALLDV ASIGADRILL LDSYISVVVF HGMTIAQWRN LGYQNQPEHQ
701: AFAQLLEAPQ EDAQMIIRDR FPVPRLVVCD QHGSQARFLL AKLNPSATYN NASEMNAGSD IIFTDDVSLQ VFFQHLQKLA VQS
Arabidopsis Description
At1g05520/T25N20_16 [Source:UniProtKB/TrEMBL;Acc:Q8H0S3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.