Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37999 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 99.31 | 91.08 |
| AT1G01230.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 90.28 | 82.8 |
| Bra028519.1-P | Field mustard | cytosol, golgi, plasma membrane | 81.94 | 76.62 |
| Bra027719.1-P | Field mustard | cytosol, golgi, plasma membrane | 77.78 | 72.73 |
| Bra033276.1-P | Field mustard | golgi, peroxisome, plasma membrane | 90.28 | 72.63 |
Protein Annotations
| EnsemblPlants:Bra032628.1 | EnsemblPlants:Bra032628.1-P | EnsemblPlantsGene:Bra032628 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | InterPro:ORMDL |
| PANTHER:PTHR12665 | PANTHER:PTHR12665:SF14 | PFAM:PF04061 | PFscan:PS51257 | PIRSF:PIRSF018147 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0002543100 | UniProt:M4EUZ5 | MapMan:35.2 | : | : |
Description
AT1G01230 (E=7e-073) | ORMDL family protein
Coordinates
chrA09:+:36917095..36917948
Molecular Weight (calculated)
16730.5 Da
IEP (calculated)
9.011
GRAVY (calculated)
0.251
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRNTEWFMY PGVWTTYILI IFFGWLAVLS VSGCSPGMAW TVVNLSHFLV TYHSFHWMKG TPFGEDQGIY NALTWWEQMD NGQQLTSNRK FLTVVPIVLY
101: LIASHTTDYR HPWLLLNTLA LMVLVVAKFP NMHKVRIFGI NADK
101: LIASHTTDYR HPWLLLNTLA LMVLVVAKFP NMHKVRIFGI NADK
001: MANLYVKAVP PPDMNRNTEW FMYPGVWTTY MLILFFGWLV VLSVSGCSPG MAWTVVNLAH FVVTYHSFHW MKGTPFADDQ GIYNGLTWWE QMDNGQQLTR
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
Arabidopsis Description
ORMDL family protein [Source:UniProtKB/TrEMBL;Acc:Q9C5I0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.