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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 3
  • plasma membrane 5
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002403.1-P
Bra006619.1-P
Bra020182.1-P
Bra026434.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G44800.1 Bra026434.1-P AT4G26455.1 21798944
AT1G44800.1 Bra002403.1-P AT5G22290.1 21798944
AT1G44800.1 Bra006619.1-P AT5G22290.1 21798944
AT1G44800.1 Bra020182.1-P AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040619.1-P Field mustard plasma membrane 91.53 90.58
AT1G44800.1 Thale cress plasma membrane 87.57 89.46
Bra010139.1-P Field mustard golgi, plasma membrane, vacuole 75.93 76.94
KRH16315 Soybean golgi, nucleus, plastid 57.14 55.81
KRH18766 Soybean golgi, nucleus, plasma membrane 57.41 55.78
VIT_18s0001g03160.t01 Wine grape golgi, plasma membrane 57.41 55.5
KRH64697 Soybean golgi, nucleus, plasma membrane 57.67 55.33
KRH53223 Soybean golgi, nucleus, plasma membrane 57.94 54.89
PGSC0003DMT400002407 Potato golgi, plasma membrane 53.17 54.62
Bra012297.1-P Field mustard plasma membrane 51.85 53.99
Solyc11g012930.1.1 Tomato golgi, plasma membrane 52.38 53.66
Bra005033.1-P Field mustard plasma membrane 46.83 47.2
Bra017068.1-P Field mustard plasma membrane 46.83 47.2
Bra000002.1-P Field mustard golgi, plasma membrane, vacuole 41.27 43.09
Bra009296.1-P Field mustard plasma membrane 44.71 42.36
Bra010143.1-P Field mustard golgi, plasma membrane 38.89 41.76
Bra017186.1-P Field mustard plasma membrane 40.21 41.08
Bra005193.1-P Field mustard plasma membrane 40.48 40.26
Bra017185.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 38.62 39.04
Bra003245.1-P Field mustard plasma membrane 38.36 38.67
Bra008810.1-P Field mustard plasma membrane 36.24 38.38
Bra014682.1-P Field mustard plasma membrane 36.77 37.37
Bra007258.1-P Field mustard plasma membrane 37.04 37.14
Bra023428.1-P Field mustard plasma membrane 36.77 36.68
Bra016963.1-P Field mustard plasma membrane 37.04 36.18
Bra000212.1-P Field mustard plasma membrane 37.57 36.13
Bra004592.1-P Field mustard plasma membrane 37.3 35.79
Bra001699.1-P Field mustard plasma membrane 30.16 32.48
Bra018748.1-P Field mustard plasma membrane 30.16 31.67
Bra021301.1-P Field mustard plasma membrane 29.63 31.11
Bra012063.1-P Field mustard plasma membrane 30.16 30.48
Bra008201.1-P Field mustard plasma membrane 30.42 29.49
Bra003751.1-P Field mustard plasma membrane 29.63 29.02
Bra015839.1-P Field mustard golgi, plasma membrane, vacuole 29.1 28.35
Bra027604.1-P Field mustard plasma membrane 26.72 26.3
Bra038272.1-P Field mustard plasma membrane 25.66 26.01
Bra027605.1-P Field mustard plasma membrane 25.93 25.59
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 26.45 25.13
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 25.66 23.49
Protein Annotations
EnsemblPlants:Bra014029.1EnsemblPlants:Bra014029.1-PEnsemblPlantsGene:Bra014029GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:EamA_domInterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF12PFAM:PF00892SUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI0002546CCFUniProt:M4DC17MapMan:24.2.1.5::
Description
AT1G44800 (E=1e-183) | nodulin MtN21 family protein
Coordinates
chrA08:+:4377538..4380519
Molecular Weight (calculated)
40676.5 Da
IEP (calculated)
9.811
GRAVY (calculated)
0.617
Length
378 amino acids
Sequence
(BLAST)
001: MKGGSGSMEK LKPILAIISL QFGYAGMYII TMVSFKHGMD HWVLATYRHI VATLVMAPFA LVFERKIRPK MTLPIFYRLL ALGILEPLMD QNFYYIGLKS
101: TSASYTSAFT NALPAVTFIL ALIFRLETVN FRKIHSIAKV VGTVITLGGA MVMTLYKGPA IEIVKAAHSS FHGGSTTATG QHWVTGTLAI MGSISTWAAF
201: FILQSFTLKL YPAELSLVTL ICGIGTILNF AVSMIFVRDL SAWKIGMDSG TLAAVYSGVV CSGIAYYIQS IVIKQRGPVF TTSFSPMCMV ITSFLGALVL
301: AEKIHLGSII GAVFIVIGLY SVVWGKSKDA VNPLDEKIVA QELPITNVVK QHGHDLSGAQ PNGLDVSSAP TNGGSANT
Best Arabidopsis Sequence Match ( AT1G44800.1 )
(BLAST)
001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
Arabidopsis Description
WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.