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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • nucleus 1
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76488 Canola plasma membrane 96.73 96.73
AT4G19185.1 Thale cress plasma membrane 89.45 89.45
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 85.18 82.08
Bra027604.1-P Field mustard plasma membrane 68.34 70.83
KRH07780 Soybean golgi, plasma membrane, plastid 68.34 70.1
KRH28983 Soybean plasma membrane 68.59 70.0
Bra038272.1-P Field mustard plasma membrane 65.33 69.71
Bra027605.1-P Field mustard plasma membrane 66.83 69.45
KRH07254 Soybean plasma membrane 67.34 69.25
VIT_02s0087g00880.t01 Wine grape plasma membrane 65.33 69.15
Solyc12g096160.1.1 Tomato plasma membrane 65.08 67.45
PGSC0003DMT400075315 Potato plasma membrane 64.82 67.19
KRH28984 Soybean plasma membrane 59.3 65.19
KRH28985 Soybean plasma membrane 62.06 63.5
PGSC0003DMT400004947 Potato plasma membrane 60.8 63.35
Solyc08g075460.2.1 Tomato plasma membrane 60.8 62.86
Solyc08g075470.2.1 Tomato plasma membrane 60.05 62.57
Solyc08g075450.2.1 Tomato plasma membrane 58.79 61.9
TraesCS6B01G298700.1 Wheat plasma membrane 57.54 57.97
Zm00001d017765_P002 Maize plasma membrane 56.78 57.51
KXG30925 Sorghum plasma membrane 56.78 57.51
TraesCS6D01G251700.1 Wheat plasma membrane 57.04 57.47
GSMUA_Achr9P23160_001 Banana plasma membrane 51.26 55.89
HORVU6Hr1G068730.1 Barley golgi, mitochondrion, plasma membrane 50.25 55.87
Os02t0703900-02 Rice cytosol, golgi, plasma membrane 54.77 55.05
KXG30926 Sorghum plasma membrane 42.21 52.01
TraesCS6A01G271500.1 Wheat plasma membrane 56.78 51.83
GSMUA_Achr4P12460_001 Banana golgi, plasma membrane, vacuole 50.0 51.82
GSMUA_Achr3P27710_001 Banana plasma membrane 51.51 50.62
TraesCS7D01G403100.2 Wheat plasma membrane 49.5 49.37
TraesCS7A01G409900.1 Wheat plasma membrane 49.25 49.12
TraesCS7B01G309300.1 Wheat plasma membrane 48.99 48.87
Os06t0708700-01 Rice plasma membrane 50.25 48.43
EER92187 Sorghum golgi, mitochondrion, plasma membrane, plastid 46.48 48.18
Zm00001d036440_P003 Maize plasma membrane 49.75 48.18
HORVU6Hr1G050960.1 Barley golgi, plasma membrane 28.64 47.5
KXG20824 Sorghum cytosol, golgi, peroxisome 49.75 46.81
EER92186 Sorghum cytosol, golgi, peroxisome 45.23 46.15
Zm00001d047208_P001 Maize plasma membrane 44.72 45.88
Zm00001d029383_P001 Maize plastid 39.45 43.49
HORVU7Hr1G095750.9 Barley cytosol, peroxisome 41.21 40.2
Bra001699.1-P Field mustard plasma membrane 31.66 35.9
Bra018748.1-P Field mustard plasma membrane 32.41 35.83
Bra021301.1-P Field mustard plasma membrane 31.91 35.28
Bra008201.1-P Field mustard plasma membrane 34.42 35.13
Bra003751.1-P Field mustard plasma membrane 33.67 34.72
Bra015839.1-P Field mustard golgi, plasma membrane, vacuole 33.17 34.02
Bra012063.1-P Field mustard plasma membrane 30.65 32.62
Bra005033.1-P Field mustard plasma membrane 27.14 28.8
Bra012297.1-P Field mustard plasma membrane 26.13 28.65
Bra010139.1-P Field mustard golgi, plasma membrane, vacuole 26.63 28.42
Bra017068.1-P Field mustard plasma membrane 26.38 28.0
Bra017185.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 25.13 26.74
Bra010143.1-P Field mustard golgi, plasma membrane 23.62 26.7
Bra014029.1-P Field mustard plasma membrane 25.13 26.45
Bra009296.1-P Field mustard plasma membrane 26.38 26.32
Bra000002.1-P Field mustard golgi, plasma membrane, vacuole 23.87 26.24
Bra040619.1-P Field mustard plasma membrane 25.13 26.18
Bra004592.1-P Field mustard plasma membrane 25.63 25.89
Bra016963.1-P Field mustard plasma membrane 24.87 25.58
Bra014682.1-P Field mustard plasma membrane 23.87 25.54
Bra008810.1-P Field mustard plasma membrane 22.86 25.49
Bra017186.1-P Field mustard plasma membrane 23.62 25.41
Bra003245.1-P Field mustard plasma membrane 23.87 25.33
Bra023428.1-P Field mustard plasma membrane 24.12 25.33
Bra007258.1-P Field mustard plasma membrane 23.87 25.2
Bra005193.1-P Field mustard plasma membrane 23.87 25.0
Bra000212.1-P Field mustard plasma membrane 23.87 24.17
Protein Annotations
MapMan:24.2.1.5EnsemblPlantsGene:Bra020969EnsemblPlants:Bra020969.1EnsemblPlants:Bra020969.1-PInterPro:EamA_domGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
UniProt:M4DWS3PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF75SUPFAM:SSF103481TMHMM:TMhelix
UniParc:UPI0002545676InterPro:WAT1-relatedSEG:seg:::
Description
AT4G19185 (E=2e-201) | integral membrane family protein
Coordinates
chrA08:-:10884490..10886629
Molecular Weight (calculated)
42980.4 Da
IEP (calculated)
8.999
GRAVY (calculated)
0.637
Length
398 amino acids
Sequence
(BLAST)
001: MTAAMKLDGG GSVAERDARM AHCAMAFVQL FNGGYHVITK VALNVGVNQL VFCVCRDLIA LSILAPLAFF RERNIRTPMN RSLLSSFFFL GLAGVFGNQL
101: LFLIGLTYTN PTYAAAIQPS IPVFTFLFAV MMGTERVNML RIEGQAKVGG TLVCVMGAIS MVLFRGPALV GDKDADFAMN HEINAKGQPE PTGWIVSVFI
201: GLGFEQWHIG VLCLIGNCMC MAAFLAIQAP VLKKYPANLS VTALSYFFGT LLMVTTAFFM VKEPLDWRLT QSEVLAVIYA GVIASALNYG LLTWSNKIIG
301: PALVALYNPL QPAASAFLSR IFLGSPIYLG SIVGGFFIIL GLYMVTWASF RERKTAVSEI GMVSHGARTS EPLIYNGTVS RIGQLLSGLP SSSVKSTD
Best Arabidopsis Sequence Match ( AT4G19185.1 )
(BLAST)
001: MTAPMILTGS GSAAERDARM AHTAMAFVQL FNGGYHVITK VALNVGVNQL VFCVCRDLLA LSILAPLAYF RERKIRTPMN KSLLLSFFFL GLAGVFGNQL
101: LFLIGLTYTN PTYAAAIQPS IPVFTFLLAV MMGTERVNLL RIEGQTKVGG TLVCVMGAVF MVVFRGPALL GDKDADFAMN NEISAKGQPE PTGWLVSGFL
201: DLGFEQWHIG VLCLIGNCMC MATFLAIQAP LLKKYPANLS VAALSYFFGT VLMCTTAFFM VKEPLDWKLT QSEVLAVIYA GVIASALNYG LLTWSNKIIG
301: PALVALYNPL QPAASAFLSR IFLGSPIYLG SVVGGFFIIL GLYMVTWASF RERKTAVSGI GIAPHGLKTS EPLIFNGTVN RLGQLFSGLP SSSVKSAD
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178UVH6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.