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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d017765_P002 Maize plasma membrane 94.4 94.4
KXG30926 Sorghum plasma membrane 60.05 73.06
KRH07254 Soybean plasma membrane 60.81 61.76
Bra038272.1-P Field mustard plasma membrane 58.52 61.66
VIT_02s0087g00880.t01 Wine grape plasma membrane 58.52 61.17
KRH07780 Soybean golgi, plasma membrane, plastid 60.31 61.08
CDX99139 Canola plasma membrane 59.29 60.68
CDX86054 Canola plasma membrane 59.29 60.68
Solyc12g096160.1.1 Tomato plasma membrane 58.27 59.64
AT3G45870.1 Thale cress plasma membrane 58.27 59.48
PGSC0003DMT400075315 Potato plasma membrane 58.02 59.38
Solyc08g075470.2.1 Tomato plasma membrane 56.23 57.85
CDY09279 Canola plasma membrane 58.27 57.54
AT5G45370.2 Thale cress plasma membrane 55.73 57.48
KRH28983 Soybean plasma membrane 57.0 57.44
Bra027604.1-P Field mustard plasma membrane 55.73 57.03
CDY13057 Canola plasma membrane 55.73 57.03
CDY23125 Canola plasma membrane 55.73 57.03
KRH28984 Soybean plasma membrane 52.42 56.91
Solyc08g075450.2.1 Tomato plasma membrane 54.71 56.88
PGSC0003DMT400004947 Potato plasma membrane 55.22 56.81
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 57.51 56.78
CDY13056 Canola plasma membrane 55.22 56.66
CDY23124 Canola plasma membrane 55.22 56.66
AT4G19185.1 Thale cress plasma membrane 57.0 56.28
CDX76488 Canola plasma membrane 57.0 56.28
Bra027605.1-P Field mustard plasma membrane 54.71 56.14
Solyc08g075460.2.1 Tomato plasma membrane 54.71 55.84
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 57.25 54.48
CDX78925 Canola plasma membrane 54.2 54.34
KRH28985 Soybean plasma membrane 53.18 53.73
EER92187 Sorghum golgi, mitochondrion, plasma membrane, plastid 48.35 49.48
EER92186 Sorghum cytosol, golgi, peroxisome 47.33 47.69
KXG20824 Sorghum cytosol, golgi, peroxisome 50.64 47.04
CDX99393 Canola mitochondrion 56.49 44.58
EES06137 Sorghum plasma membrane 34.1 34.72
EES15167 Sorghum plasma membrane 34.61 33.92
EES02603 Sorghum plasma membrane 30.03 31.47
KXG19264 Sorghum plasma membrane 28.5 31.11
KXG40121 Sorghum golgi, plasma membrane, vacuole 22.9 27.52
EES19520 Sorghum peroxisome 27.23 26.82
EES07591 Sorghum golgi, plasma membrane 26.21 26.75
EER92847 Sorghum plasma membrane 25.19 26.54
EER94681 Sorghum plasma membrane 25.19 25.71
OQU78229 Sorghum plasma membrane 25.7 25.57
EES03768 Sorghum plasma membrane 26.46 25.49
EER88045 Sorghum golgi, plasma membrane, plastid 25.45 25.32
OQU91876 Sorghum golgi, plasma membrane 23.66 25.27
Protein Annotations
MapMan:24.2.1.5UniProt:A0A194YSW7InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlants:KXG30925ProteinID:KXG30925ProteinID:KXG30925.1PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF133
EnsemblPlantsGene:SORBI_3004G268600SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0007F1B499InterPro:WAT1-relatedSEG:seg
Description
hypothetical protein
Coordinates
chr4:-:61270719..61273685
Molecular Weight (calculated)
42220.2 Da
IEP (calculated)
8.547
GRAVY (calculated)
0.657
Length
393 amino acids
Sequence
(BLAST)
001: MAARERDGEG RRAHLTMVGV QLVYAGYHVI AKQALNVGVN RVVFCVFRDL LALSVLAPLA FFQHRVSPAQ ARPPPLTWRL VGSFFLLGLT GVFGNQLLFL
101: LGLSYTNPTY AAAIQPSIPA FTFILALIMG TETVSLVSNE GRAKIGGTVV CVLGAVLMVL YRGPAVFGSS ELELDVHSHG VIADMSQPEP AGPLTSLFIA
201: FGLEKFHIGV LCLIGNCLCM ATYLALQAPI LVKYPSSLSL TAYSYFFGVV LMVISGVFAT NDKHDWSLTQ SEFAAVVYAG VMASALNYVL LTWSNKILGP
301: AMVALYNPLQ PVVSALLSMI FLGSPIYLGS IIGGLLIISG LYLVTWARHR EKLPGIGVSY VKCASESLDG PSHVAKNVPF ISLSRLRDVP HES
Best Arabidopsis Sequence Match ( AT5G45370.4 )
(BLAST)
001: MAAPAILNGG DATERETRMA HSAMTLVQVI NGGYHVVTKV ALNVGVNQLV FCVFRDLLAL SILAPLAFFR ERTIRPPMNR SIFFSLFFLG LAGIFGNQLL
101: FLMGLSYTNP TYAAAIQPSI PVFTFLLAVL MGTEKVNLLK VEGQTKVGGT LVCVSGAIAM ALFRGPALFG GKDAADSVKS VIIDRSQPEL NGWLVSSFLG
201: LGFDQWHIGV LCLIGNCMCM AAFLAVQAPV LKKYPAYLSV AAYSYFFGAS IMITTAILFV REPKDWSLTQ SEVLAVIFAG VFASALNYGL LTWSNKILGA
301: ALVSLYNPLQ PATSAFLSTI FLGSPIYLGS VLGGILIICG LYMVTWASYR EQQTTSAGNE IASSSDVRIS EPFIYRDETG K
Arabidopsis Description
WAT1-related protein At5g45370 [Source:UniProtKB/Swiss-Prot;Acc:F4KD68]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.