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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027682_P001 Maize golgi, plasma membrane 90.62 80.86
Os03t0149300-01 Rice plasma membrane 78.82 78.61
TraesCS4A01G415600.1 Wheat plasma membrane 72.39 72.39
KXG40121 Sorghum golgi, plasma membrane, vacuole 63.27 72.17
TraesCS4D01G313000.1 Wheat mitochondrion, plasma membrane 73.46 71.54
HORVU4Hr1G080190.6 Barley peroxisome, plasma membrane 75.07 66.19
EER94681 Sorghum plasma membrane 64.61 62.6
GSMUA_Achr11P... Banana plasma membrane, vacuole 55.76 61.9
GSMUA_Achr8P14310_001 Banana plasma membrane 57.91 58.54
KRH34496 Soybean plasma membrane 54.69 57.63
KRG92304 Soybean plasma membrane 32.44 57.08
VIT_05s0049g00450.t01 Wine grape mitochondrion, plasma membrane 55.23 55.98
Solyc09g089860.2.1 Tomato plasma membrane 54.42 55.62
PGSC0003DMT400033974 Potato plasma membrane 37.27 55.6
PGSC0003DMT400034864 Potato plasma membrane 54.16 55.49
PGSC0003DMT400044387 Potato plasma membrane 53.62 54.79
PGSC0003DMT400015540 Potato plasma membrane 43.43 54.36
Solyc03g005480.2.1 Tomato plasma membrane 52.81 54.12
Solyc04g012070.1.1 Tomato plasma membrane 51.21 54.11
VIT_07s0005g03080.t01 Wine grape plasma membrane 52.28 53.57
PGSC0003DMT400034863 Potato plasma membrane 51.47 52.75
TraesCS4B01G316400.2 Wheat plastid 56.84 51.33
KRH34492 Soybean plasma membrane 40.48 51.01
KRH34491 Soybean plasma membrane 39.41 50.87
KRH19541 Soybean plasma membrane 49.6 50.0
KRH32169 Soybean plasma membrane 29.22 49.32
PGSC0003DMT400071278 Potato plasma membrane 45.31 49.27
EES19520 Sorghum peroxisome 37.27 34.84
OQU91876 Sorghum golgi, plasma membrane 33.51 33.97
EES03768 Sorghum plasma membrane 35.39 32.35
KXG19264 Sorghum plasma membrane 30.83 31.94
OQU78229 Sorghum plasma membrane 33.78 31.9
EER88045 Sorghum golgi, plasma membrane, plastid 33.24 31.39
EES07591 Sorghum golgi, plasma membrane 31.9 30.91
EES06137 Sorghum plasma membrane 30.83 29.79
EES02603 Sorghum plasma membrane 29.76 29.6
EES15167 Sorghum plasma membrane 31.37 29.18
KXG30926 Sorghum plasma membrane 21.98 25.39
KXG30925 Sorghum plasma membrane 26.54 25.19
EER92187 Sorghum golgi, mitochondrion, plasma membrane, plastid 24.4 23.7
EER92186 Sorghum cytosol, golgi, peroxisome 24.13 23.08
KXG20824 Sorghum cytosol, golgi, peroxisome 24.4 21.51
Protein Annotations
MapMan:24.2.1.5EntrezGene:8080551UniProt:C5WXW6EnsemblPlants:EER92847ProteinID:EER92847ProteinID:EER92847.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF46EnsemblPlantsGene:SORBI_3001G502700SUPFAM:SSF103481unigene:Sbi.21544
TMHMM:TMhelixUniParc:UPI0001A82B4AInterPro:WAT1-relatedRefSeq:XP_002465849.1SEG:seg:
Description
hypothetical protein
Coordinates
chr1:+:77131111..77133922
Molecular Weight (calculated)
41502.5 Da
IEP (calculated)
8.803
GRAVY (calculated)
0.476
Length
373 amino acids
Sequence
(BLAST)
001: MALLEVAGGL WVRYAPHVLM VLAQLCYTLM YFITEAGFNQ GLNPYVYITY RHLLVAVLIW PFAYYQEKGL RPKMTLMLFM EIFVLSLLGV SLTLNMYFAS
101: LKYTSPTFVT SVVNTIASMT FVIAIILRME IVDVKSLRGL AKIAGTVVSF AGVTTMTLYK GAAITSLWKS PVHIPGSGSG GVGHDSWVKG SVLAVASCIC
201: WSIWYIMQAS SLKRYPAQLS LTAWMCTVGG IQSTIFTALM QHKPEDWRIG FGLKFWCIVY SGIACNGFTV FVQLWCTEKK GPVFVTMFNP LSTIMVAILA
301: YFIFGENLYV GSIIGGGVVI VGLYMLLWGK EKDDQEEHGS TGKEREQLEM DCEKQAKKVS DVYEAPNPIK RTK
Best Arabidopsis Sequence Match ( AT2G37460.1 )
(BLAST)
001: MEEVKKRDCM EKARPFISMV VLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATIVMAP FAFYFDKKVR PKMTLMIFFK ISLLGLLEPV IDQNLYYLGM
101: KYTTATFATA MYNVLPAITF VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLFWTKG VSAHNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAITLR TYPAELSLTA WICLMGTIEG TAVALVMEKG NPSAWAIGWD TKLLTATYSG IVCSALAYYV GGVVMKTRGP VFVTAFSPLC MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKGK DYKYNSTLQL DDESAQPKLE LSGNGKDNVD HEVITISKQG EQRRTAVETV
Arabidopsis Description
WAT1-related protein At2g37460 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS1]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.