Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92847 | Sorghum | plasma membrane | 78.61 | 78.82 |
| TraesCS4A01G415600.1 | Wheat | plasma membrane | 75.67 | 75.87 |
| TraesCS4D01G313000.1 | Wheat | mitochondrion, plasma membrane | 76.2 | 74.41 |
| KXG40121 | Sorghum | golgi, plasma membrane, vacuole | 61.5 | 70.34 |
| Zm00001d027682_P001 | Maize | golgi, plasma membrane | 77.27 | 69.14 |
| HORVU4Hr1G080190.6 | Barley | peroxisome, plasma membrane | 77.81 | 68.79 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 55.35 | 61.61 |
| GSMUA_Achr8P14310_001 | Banana | plasma membrane | 56.42 | 57.18 |
| VIT_05s0049g00450.t01 | Wine grape | mitochondrion, plasma membrane | 56.15 | 57.07 |
| KRH34496 | Soybean | plasma membrane | 53.21 | 56.21 |
| PGSC0003DMT400033974 | Potato | plasma membrane | 37.17 | 55.6 |
| Solyc09g089860.2.1 | Tomato | plasma membrane | 54.01 | 55.34 |
| KRG92304 | Soybean | plasma membrane | 31.02 | 54.72 |
| PGSC0003DMT400015540 | Potato | plasma membrane | 43.58 | 54.7 |
| PGSC0003DMT400034864 | Potato | plasma membrane | 53.21 | 54.67 |
| Solyc04g012070.1.1 | Tomato | plasma membrane | 51.07 | 54.11 |
| PGSC0003DMT400044387 | Potato | plasma membrane | 52.41 | 53.7 |
| Solyc03g005480.2.1 | Tomato | plasma membrane | 51.87 | 53.3 |
| VIT_07s0005g03080.t01 | Wine grape | plasma membrane | 51.6 | 53.02 |
| PGSC0003DMT400034863 | Potato | plasma membrane | 50.53 | 51.92 |
| TraesCS4B01G316400.2 | Wheat | plastid | 56.95 | 51.57 |
| KRH34491 | Soybean | plasma membrane | 38.5 | 49.83 |
| KRH19541 | Soybean | plasma membrane | 49.2 | 49.73 |
| KRH34492 | Soybean | plasma membrane | 38.77 | 48.99 |
| KRH32169 | Soybean | plasma membrane | 28.61 | 48.42 |
| PGSC0003DMT400071278 | Potato | plasma membrane | 43.58 | 47.52 |
| Os10t0210500-02 | Rice | plasma membrane | 32.62 | 33.52 |
| Os01t0803300-01 | Rice | golgi, plasma membrane | 29.41 | 33.23 |
| Os06t0210000-00 | Rice | golgi, plasma membrane | 34.22 | 32.9 |
| Os02t0114100-00 | Rice | plasma membrane | 33.69 | 32.64 |
| Os08t0561500-01 | Rice | plasma membrane | 32.89 | 31.78 |
| Os02t0331400-00 | Rice | plasma membrane | 27.81 | 31.33 |
| Os01t0117900-02 | Rice | plasma membrane | 31.28 | 31.28 |
| Os02t0768300-01 | Rice | golgi, plasma membrane | 32.09 | 31.25 |
| Os05t0493800-01 | Rice | golgi, plasma membrane | 32.62 | 29.83 |
| Os05t0409500-00 | Rice | mitochondrion | 36.9 | 28.34 |
| Os02t0703900-02 | Rice | cytosol, golgi, plasma membrane | 24.6 | 23.23 |
| Os06t0708700-01 | Rice | plasma membrane | 24.06 | 21.79 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:4331629 | ProteinID:ABF93996.1 | EMBL:AK242783 | ProteinID:BAS82307.1 | ProteinID:EEE58327.1 |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| EnsemblPlantsGene:Os03g0149300 | EnsemblPlants:Os03t0149300-01 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF46 | UniProt:Q10RR0 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0000DB44B3 | InterPro:WAT1-related | RefSeq:XP_015627811.1 | SEG:seg |
Description
Protein of unknown function DUF6, transmembrane domain containing protein. (Os03t0149300-01)
Coordinates
chr3:-:2748162..2753327
Molecular Weight (calculated)
41866.6 Da
IEP (calculated)
9.094
GRAVY (calculated)
0.418
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MALHVLASMG DLWRRYAPHN LMILSQLCYT LMYFITEAAF NKGLNPFIYV TYRHLVVAVF LAPFAYYQEK KLRPRMTLML FLEIFVLSLL GVSLTLNMYF
101: ASLMYTSPTF VTSVVNTVAS ITFVIAIVVR MEIVDVRSIR GLAKVAGTVV SFAGVTTMTL YKGTAISSPW KAPISIHGGG GGGGVHESWL KGSFLAVASC
201: ICWSIWYILQ ASSLKRYPAQ LSLTAWMCTV GGIQSAVFTA FMQHKPEDWR IGFGLKFWCI VYSGFACNGF TVFAQLWCTE KKGPVFVTMF NPLSTIMVAI
301: LAYFMFGENL YVGSIIGGVV VILGLYMLLW GKDKDQEYNA NKQQESDLDC EKQARITEFS AAQNDQEEPR RTKK
101: ASLMYTSPTF VTSVVNTVAS ITFVIAIVVR MEIVDVRSIR GLAKVAGTVV SFAGVTTMTL YKGTAISSPW KAPISIHGGG GGGGVHESWL KGSFLAVASC
201: ICWSIWYILQ ASSLKRYPAQ LSLTAWMCTV GGIQSAVFTA FMQHKPEDWR IGFGLKFWCI VYSGFACNGF TVFAQLWCTE KKGPVFVTMF NPLSTIMVAI
301: LAYFMFGENL YVGSIIGGVV VILGLYMLLW GKDKDQEYNA NKQQESDLDC EKQARITEFS AAQNDQEEPR RTKK
001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
Arabidopsis Description
WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.