Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03768 | Sorghum | plasma membrane | 87.61 | 71.08 |
| TraesCS3A01G331900.1 | Wheat | golgi, plasma membrane, vacuole | 81.27 | 70.42 |
| TraesCS3B01G362000.1 | Wheat | golgi, plasma membrane, vacuole | 80.97 | 69.25 |
| TraesCS3D01G325400.1 | Wheat | golgi, plasma membrane, vacuole | 80.66 | 68.99 |
| Zm00001d043171_P001 | Maize | plasma membrane | 85.2 | 68.28 |
| Os05t0493800-01 | Rice | golgi, plasma membrane | 77.95 | 63.08 |
| GSMUA_Achr4P00260_001 | Banana | plasma membrane | 68.28 | 59.16 |
| VIT_13s0084g00090.t01 | Wine grape | golgi, plasma membrane, plastid | 65.56 | 53.85 |
| Solyc10g078270.1.1 | Tomato | golgi, plasma membrane, plastid | 61.33 | 53.0 |
| PGSC0003DMT400018488 | Potato | golgi, plasma membrane, plastid | 60.73 | 52.62 |
| CDX99013 | Canola | golgi, plasma membrane, vacuole | 24.77 | 52.56 |
| GSMUA_Achr7P21250_001 | Banana | plastid | 51.36 | 51.67 |
| KRH62737 | Soybean | plasma membrane | 61.93 | 51.51 |
| KRH56218 | Soybean | plasma membrane | 61.03 | 51.01 |
| KRH20615 | Soybean | plasma membrane | 60.12 | 48.66 |
| HORVU3Hr1G078710.1 | Barley | golgi, plasma membrane | 55.29 | 48.54 |
| HORVU5Hr1G044210.1 | Barley | golgi | 55.29 | 48.41 |
| KRH13279 | Soybean | plasma membrane | 59.82 | 48.41 |
| PGSC0003DMT400072217 | Potato | plasma membrane | 55.89 | 48.05 |
| Os05t0409500-00 | Rice | mitochondrion | 70.09 | 47.64 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 57.4 | 47.26 |
| Solyc10g080980.1.1 | Tomato | golgi, plasma membrane, vacuole | 54.68 | 47.26 |
| Solyc10g080990.1.1 | Tomato | golgi, plasma membrane, plastid | 55.89 | 47.07 |
| CDX70003 | Canola | plasma membrane | 56.19 | 46.62 |
| Bra009296.1-P | Field mustard | plasma membrane | 55.29 | 45.86 |
| Os10t0210500-02 | Rice | plasma membrane | 43.2 | 39.29 |
| CDX99012 | Canola | plasma membrane | 25.68 | 37.95 |
| Os06t0210000-00 | Rice | golgi, plasma membrane | 44.11 | 37.53 |
| Os02t0768300-01 | Rice | golgi, plasma membrane | 42.3 | 36.46 |
| Os02t0114100-00 | Rice | plasma membrane | 34.74 | 29.79 |
| Os08t0561500-01 | Rice | plasma membrane | 34.44 | 29.46 |
| Os03t0149300-01 | Rice | plasma membrane | 33.23 | 29.41 |
| Os01t0117900-02 | Rice | plasma membrane | 31.72 | 28.07 |
| Os02t0331400-00 | Rice | plasma membrane | 27.79 | 27.71 |
| Os02t0703900-02 | Rice | cytosol, golgi, plasma membrane | 24.17 | 20.2 |
| Os06t0708700-01 | Rice | plasma membrane | 23.26 | 18.64 |
Protein Annotations
| MapMan:24.2.1.5 | ProteinID:BAF06465.1 | ProteinID:BAS74817.1 | InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:Os01g0803300 | EnsemblPlants:Os01t0803300-01 | PFAM:PF00892 |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF140 | UniProt:Q0JIG3 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0000DD8D94 |
| InterPro:WAT1-related | SEG:seg | : | : | : | : |
Description
Protein of unknown function DUF6, transmembrane domain containing protein. (Os01t0803300-01)
Coordinates
chr1:-:34043179..34044975
Molecular Weight (calculated)
35292.6 Da
IEP (calculated)
8.580
GRAVY (calculated)
0.553
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: KVRPKMTWSV FLQIFVLALL GPVIDQNFYY AGLKFTGPTF ACAMSNILPA MTFVMAVIFR MEKVDLKKVR CQAKVAGTLV TVAGAMMMTL YKGPLMQMAW
101: TSHVQAPHGH GAEAPAAAAA VDPSGREWFL GSLFVIIATL AWASLFILQA HTLKKYSAPL SLTTLICFVG TLQAIVVTFA MEHRPSVWAI GFDMNLLAAA
201: YAGIVTSSIA YYVQGLVIQK TGPVFASAFS PLMMIIVAGM GSFILAEKIY LGGVLGAVLI VVGLYSVLWG KHKETQEQDA AMMELPVASK GNDAEFTAAT
301: VVGDDDDAAD CKKANGVKKS SSSNEQGASA V
101: TSHVQAPHGH GAEAPAAAAA VDPSGREWFL GSLFVIIATL AWASLFILQA HTLKKYSAPL SLTTLICFVG TLQAIVVTFA MEHRPSVWAI GFDMNLLAAA
201: YAGIVTSSIA YYVQGLVIQK TGPVFASAFS PLMMIIVAGM GSFILAEKIY LGGVLGAVLI VVGLYSVLWG KHKETQEQDA AMMELPVASK GNDAEFTAAT
301: VVGDDDDAAD CKKANGVKKS SSSNEQGASA V
001: MSMEEISSCE SFLTSSKPYF AMISLQFGYA GMNIITKISL NTGMSHYVLV VYRHAIATAV IAPFAFFFER KAQPKITFSI FMQLFILGLL GPVIDQNFYY
101: MGLKYTSPTF SCAMSNMLPA MTFILAVLFR MEMLDLKKLW CQAKIAGTVV TVAGAMLMTI YKGPIVELFW TKYMHIQDSS HANTTSSKNS SSDKEFLKGS
201: ILLIFATLAW ASLFVLQAKI LKTYAKHQLS LTTLICFIGT LQAVAVTFVM EHNPSAWRIG WDMNLLAAAY SGIVASSISY YVQGIVMKKR GPVFATAFSP
301: LMMVIVAVMG SFVLAEKIFL GGVIGAVLIV IGLYAVLWGK QKENQVTICE LAKIDSNSKV TEDVEANGSK MKISEGDNSM LSTIVISVPL SETHLKKTIQ
401: EP
101: MGLKYTSPTF SCAMSNMLPA MTFILAVLFR MEMLDLKKLW CQAKIAGTVV TVAGAMLMTI YKGPIVELFW TKYMHIQDSS HANTTSSKNS SSDKEFLKGS
201: ILLIFATLAW ASLFVLQAKI LKTYAKHQLS LTTLICFIGT LQAVAVTFVM EHNPSAWRIG WDMNLLAAAY SGIVASSISY YVQGIVMKKR GPVFATAFSP
301: LMMVIVAVMG SFVLAEKIFL GGVIGAVLIV IGLYAVLWGK QKENQVTICE LAKIDSNSKV TEDVEANGSK MKISEGDNSM LSTIVISVPL SETHLKKTIQ
401: EP
Arabidopsis Description
WAT1-related protein At5g07050 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL41]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.