Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G078710.1 | Barley | golgi, plasma membrane | 94.71 | 94.96 |
| TraesCS3A01G331900.1 | Wheat | golgi, plasma membrane, vacuole | 66.4 | 65.71 |
| TraesCS3D01G325400.1 | Wheat | golgi, plasma membrane, vacuole | 66.14 | 64.6 |
| TraesCS3B01G362000.1 | Wheat | golgi, plasma membrane, vacuole | 65.87 | 64.34 |
| EES03768 | Sorghum | plasma membrane | 63.49 | 58.82 |
| HORVU1Hr1G063340.4 | Barley | peroxisome | 55.56 | 57.85 |
| Zm00001d043171_P001 | Maize | plasma membrane | 62.96 | 57.63 |
| HORVU1Hr1G068120.1 | Barley | plasma membrane | 58.47 | 56.81 |
| HORVU0Hr1G023720.1 | Barley | plasma membrane | 58.2 | 56.56 |
| Os01t0803300-01 | Rice | golgi, plasma membrane | 48.41 | 55.29 |
| CDX99012 | Canola | plasma membrane | 32.54 | 54.91 |
| GSMUA_Achr4P00260_001 | Banana | plasma membrane | 53.17 | 52.62 |
| VIT_13s0084g00090.t01 | Wine grape | golgi, plasma membrane, plastid | 51.06 | 47.89 |
| Solyc10g078270.1.1 | Tomato | golgi, plasma membrane, plastid | 48.41 | 47.78 |
| PGSC0003DMT400018488 | Potato | golgi, plasma membrane, plastid | 48.15 | 47.64 |
| KRH56218 | Soybean | plasma membrane | 48.15 | 45.96 |
| KRH62737 | Soybean | plasma membrane | 47.88 | 45.48 |
| Solyc10g080990.1.1 | Tomato | golgi, plasma membrane, plastid | 47.09 | 45.29 |
| GSMUA_Achr7P21250_001 | Banana | plastid | 39.42 | 45.29 |
| PGSC0003DMT400072217 | Potato | plasma membrane | 46.03 | 45.19 |
| Solyc10g080980.1.1 | Tomato | golgi, plasma membrane, vacuole | 45.5 | 44.91 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 46.3 | 43.53 |
| KRH20615 | Soybean | plasma membrane | 46.83 | 43.28 |
| KRH13279 | Soybean | plasma membrane | 46.56 | 43.03 |
| CDX70003 | Canola | plasma membrane | 45.24 | 42.86 |
| Bra009296.1-P | Field mustard | plasma membrane | 44.97 | 42.61 |
| HORVU7Hr1G109820.1 | Barley | golgi, plasma membrane | 34.39 | 35.62 |
| HORVU6Hr1G080260.1 | Barley | plasma membrane | 35.45 | 34.81 |
| HORVU6Hr1G080220.1 | Barley | golgi, plasma membrane | 34.92 | 34.02 |
| HORVU6Hr1G080270.3 | Barley | plasma membrane | 34.39 | 32.75 |
| HORVU6Hr1G080150.1 | Barley | plasma membrane | 34.13 | 32.58 |
| HORVU7Hr1G035430.6 | Barley | golgi | 33.6 | 29.06 |
| HORVU3Hr1G001040.3 | Barley | golgi, peroxisome | 27.78 | 24.94 |
| HORVU3Hr1G002710.4 | Barley | plasma membrane | 26.19 | 24.5 |
| HORVU4Hr1G080190.6 | Barley | peroxisome, plasma membrane | 26.98 | 24.11 |
| HORVU6Hr1G068730.1 | Barley | golgi, mitochondrion, plasma membrane | 21.43 | 22.63 |
| CDX99013 | Canola | golgi, plasma membrane, vacuole | 6.88 | 16.67 |
| HORVU7Hr1G095750.9 | Barley | cytosol, peroxisome | 15.34 | 14.22 |
| HORVU6Hr1G050960.1 | Barley | golgi, plasma membrane | 8.99 | 14.17 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G044210.1 | EnsemblPlantsGene:HORVU5Hr1G044210 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:EamA_dom |
| InterPro:WAT1-related | ncoils:Coil | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF140 | PFAM:PF00892 | SEG:seg |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000B467D70 | UniProt:A0A287QZS2 | MapMan:24.2.1.5 | : |
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A287QZS2]
Coordinates
chrchr5H:+:340681821..340683668
Molecular Weight (calculated)
39284.5 Da
IEP (calculated)
10.809
GRAVY (calculated)
0.139
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX EKAKPYIAMI CLQFGYAGMN VITKVSLNGG MSHYVLVVYR HVFATVSIAP FALILERKVR PKMTWSSFLQ IFVLALLGPV
101: IDQNFYYVGL KYTGPTFACA MSNILPAMTF VMAFIFRMEK VDLRKVRCQA KVAGTVVTVA GAMLMTLYKG PLMRMAWTNH GQANGGEAPA IDPTGREWFL
201: GSLFIIIATL AWASLFILQA HTLKQYSAPL SLTTLICFVG TLQAIVVTFA MEHRPSVWTI GFDMNLLAAA YAVRHRDVEH SVLRARPGDP EDRAGVRVGV
301: QPADDDRGGR DGLLHPLRED ILGRHPRLRP HRHRALLRAV GKAQGDPGGV RGSAGGAAHG HGLLQLQGRG RRRTGARS
101: IDQNFYYVGL KYTGPTFACA MSNILPAMTF VMAFIFRMEK VDLRKVRCQA KVAGTVVTVA GAMLMTLYKG PLMRMAWTNH GQANGGEAPA IDPTGREWFL
201: GSLFIIIATL AWASLFILQA HTLKQYSAPL SLTTLICFVG TLQAIVVTFA MEHRPSVWTI GFDMNLLAAA YAVRHRDVEH SVLRARPGDP EDRAGVRVGV
301: QPADDDRGGR DGLLHPLRED ILGRHPRLRP HRHRALLRAV GKAQGDPGGV RGSAGGAAHG HGLLQLQGRG RRRTGARS
001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI
Arabidopsis Description
WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.