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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX70003 Canola plasma membrane 91.96 51.63
CDY22493 Canola plasma membrane 44.2 48.06
AT5G07050.1 Thale cress golgi, plasma membrane, vacuole 85.71 47.76
KRH56218 Soybean plasma membrane 66.96 37.88
VIT_13s0084g00090.t01 Wine grape golgi, plasma membrane, plastid 67.41 37.47
GSMUA_Achr6P08440_001 Banana plasma membrane 62.5 37.33
KRH62737 Soybean plasma membrane 66.07 37.19
KRH20615 Soybean plasma membrane 67.86 37.16
KRH13279 Soybean plasma membrane 66.52 36.43
GSMUA_Achr9P17350_001 Banana golgi, plasma membrane 58.04 36.41
PGSC0003DMT400018488 Potato golgi, plasma membrane, plastid 61.61 36.13
Solyc10g078270.1.1 Tomato golgi, plasma membrane, plastid 61.61 36.03
GSMUA_Achr10P... Banana plasma membrane 61.16 35.96
GSMUA_Achr3P09230_001 Banana plasma membrane 61.61 35.66
GSMUA_Achr4P00260_001 Banana plasma membrane 59.38 34.82
EES19520 Sorghum peroxisome 61.16 34.34
HORVU0Hr1G023720.1 Barley plasma membrane 58.48 33.68
HORVU1Hr1G068120.1 Barley plasma membrane 58.48 33.68
TraesCS1A01G310300.1 Wheat plasma membrane 58.48 33.68
TraesCS1B01G321500.1 Wheat plasma membrane 58.48 33.68
TraesCS1D01G309800.1 Wheat plasma membrane 58.48 33.68
TraesCS3A01G331900.1 Wheat golgi, plasma membrane, vacuole 57.14 33.51
PGSC0003DMT400072217 Potato plasma membrane 57.59 33.51
Zm00001d010287_P002 Maize golgi, plasma membrane, vacuole 61.16 33.5
TraesCS1B01G267300.1 Wheat plasma membrane 60.27 33.42
HORVU1Hr1G063340.4 Barley peroxisome 54.02 33.33
Solyc10g080990.1.1 Tomato golgi, plasma membrane, plastid 58.48 33.33
TraesCS1A01G256700.1 Wheat peroxisome 59.82 33.25
TraesCS3B01G362000.1 Wheat golgi, plasma membrane, vacuole 57.14 33.07
TraesCS1D01G256100.1 Wheat golgi, peroxisome, plasma membrane 59.82 33.0
Zm00001d038554_P001 Maize plasma membrane 58.04 32.99
OQU78229 Sorghum plasma membrane 58.04 32.91
Solyc10g080980.1.1 Tomato golgi, plasma membrane, vacuole 56.25 32.9
HORVU3Hr1G078710.1 Barley golgi, plasma membrane 55.36 32.89
CDX79735 Canola golgi, plasma membrane, vacuole 41.52 32.86
TraesCS3D01G325400.1 Wheat golgi, plasma membrane, vacuole 56.7 32.82
HORVU5Hr1G044210.1 Barley golgi 54.91 32.54
Os05t0493800-01 Rice golgi, plasma membrane 59.38 32.52
CDY63536 Canola plasma membrane 47.32 31.83
GSMUA_Achr6P16060_001 Banana plasma membrane 45.98 31.5
EES03768 Sorghum plasma membrane 57.14 31.37
Zm00001d043171_P001 Maize plasma membrane 56.7 30.75
CDY06954 Canola plasma membrane 53.12 30.75
Zm00001d010655_P001 Maize plasma membrane 58.04 30.23
GSMUA_Achr7P21250_001 Banana plastid 44.2 30.09
CDY14752 Canola plasma membrane 51.34 29.72
CDY68060 Canola plasma membrane 51.34 29.72
CDX79964 Canola plasma membrane 51.34 29.19
CDY35431 Canola plasma membrane 50.89 29.01
CDY53669 Canola plasma membrane 50.89 28.93
CDY68855 Canola plasma membrane 46.88 28.0
CDY00403 Canola plasma membrane 46.88 27.7
Os05t0409500-00 Rice mitochondrion 59.38 27.31
CDX79734 Canola golgi, plasma membrane, vacuole 43.75 27.07
CDX72122 Canola plasma membrane 45.09 26.93
CDY07788 Canola golgi, plasma membrane, vacuole 43.3 26.8
CDX76001 Canola plasma membrane 44.2 26.61
CDY01310 Canola plasma membrane 45.98 26.55
CDY04680 Canola plasma membrane 46.88 26.52
CDX93255 Canola plasma membrane 44.2 26.33
CDY07016 Canola plasma membrane 44.2 26.33
CDX93378 Canola cytosol, plasma membrane, vacuole 43.75 26.27
CDY56779 Canola plasma membrane 44.2 26.26
CDY12554 Canola plasma membrane 44.64 26.18
CDY14996 Canola plasma membrane 44.64 26.18
CDX74958 Canola plasma membrane 44.2 26.05
CDX91365 Canola plasma membrane 44.2 26.05
CDY18444 Canola plasma membrane 43.3 26.01
CDY49560 Canola golgi, plasma membrane, vacuole 43.3 26.01
CDX94896 Canola plasma membrane 42.86 25.95
CDY20446 Canola plasma membrane 43.3 25.87
CDY53594 Canola plasma membrane 43.3 25.87
CDY63388 Canola golgi, plasma membrane, vacuole 42.86 25.74
Os01t0803300-01 Rice golgi, plasma membrane 37.95 25.68
CDY09817 Canola plasma membrane 38.39 24.93
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 41.52 24.87
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 41.07 24.6
CDY65991 Canola plasma membrane 38.39 22.75
CDY29141 Canola plasma membrane 37.95 22.19
CDX85633 Canola plasma membrane 37.5 22.16
CDX91104 Canola plasma membrane 37.5 22.16
CDX75960 Canola plasma membrane 29.02 22.03
CDY51934 Canola plasma membrane 29.02 22.03
CDX75163 Canola plasma membrane 37.05 21.61
CDX95542 Canola plasma membrane 29.02 21.31
CDX93689 Canola plasma membrane 32.59 20.28
CDY40602 Canola plasma membrane 26.79 20.07
CDY18510 Canola plasma membrane 32.14 20.0
CDY45218 Canola plasma membrane 33.04 19.79
CDY47518 Canola golgi, plasma membrane, vacuole 33.93 19.59
CDX68127 Canola plasma membrane 33.48 19.43
CDX85897 Canola plasma membrane 33.48 19.33
CDY64209 Canola golgi, plasma membrane, vacuole 33.48 19.33
CDY20378 Canola plasma membrane 32.14 18.65
CDY39037 Canola golgi, plasma membrane, vacuole 25.0 18.12
CDX86054 Canola plasma membrane 28.57 16.67
CDX99139 Canola plasma membrane 28.57 16.67
CDY13057 Canola plasma membrane 27.68 16.15
CDY23125 Canola plasma membrane 27.68 16.15
CDY23124 Canola plasma membrane 27.23 15.93
CDY13056 Canola plasma membrane 26.79 15.67
CDY09279 Canola plasma membrane 27.23 15.33
CDX76488 Canola plasma membrane 26.34 14.82
CDX78925 Canola plasma membrane 22.77 13.01
CDX99393 Canola mitochondrion 26.34 11.85
CDY65383 Canola golgi, plasma membrane, vacuole 11.61 10.28
CDX99013 Canola golgi, plasma membrane, vacuole 4.02 5.77
Protein Annotations
EnsemblPlants:CDX99012EnsemblPlantsGene:GSBRNA2T00107135001GO:A0A078EDB4GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF19PFAM:PF00892ProteinID:CDX99012ProteinID:CDX99012.1
SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EE655AMapMan:24.2.1.5:
Description
BnaC09g48230D
Coordinates
chrLK031907:+:1129945..1130974
Molecular Weight (calculated)
25417.9 Da
IEP (calculated)
9.460
GRAVY (calculated)
0.541
Length
224 amino acids
Sequence
(BLAST)
001: MSMEKLGCCE SFLKSSKPYF AMISLQFGYA GMNIITKISL NTGMSHYVLV VYRHAIATAV IAPFAFFFES KAQPKITFTI FMQLFILGLL GLPVIDQNFY
101: YMGLKYTSPT FSCAMSNMLP AMTFILAVLF RMEMLDVKKL WCQAKIAGTV VTVAGAMLMT IYKGPIVELF WTKYMHLQHA NDTTPSSNSN DNKDFLXFFV
201: GCTFTIIHSL FIGWIMIYVI RRRY
Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)
001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI
Arabidopsis Description
WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.