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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY00403 Canola plasma membrane 89.65 93.67
CDY01310 Canola plasma membrane 91.16 93.04
AT1G21890.1 Thale cress plasma membrane 88.38 89.97
VIT_18s0001g03160.t01 Wine grape golgi, plasma membrane 59.85 60.61
CDY49560 Canola golgi, plasma membrane, vacuole 54.29 57.64
CDY63388 Canola golgi, plasma membrane, vacuole 54.04 57.37
CDY12554 Canola plasma membrane 53.03 54.97
CDY14996 Canola plasma membrane 52.78 54.71
Solyc11g012930.1.1 Tomato golgi, plasma membrane 49.75 53.39
PGSC0003DMT400002407 Potato golgi, plasma membrane 49.24 52.99
CDY20446 Canola plasma membrane 45.45 48.0
CDY53594 Canola plasma membrane 45.45 48.0
CDY07016 Canola plasma membrane 45.2 47.61
CDX79735 Canola golgi, plasma membrane, vacuole 33.84 47.35
CDX93255 Canola plasma membrane 44.95 47.34
CDY22493 Canola plasma membrane 24.49 47.09
CDY07788 Canola golgi, plasma membrane, vacuole 42.93 46.96
CDX93378 Canola cytosol, plasma membrane, vacuole 44.19 46.92
CDX99012 Canola plasma membrane 26.52 46.88
CDY18444 Canola plasma membrane 43.69 46.38
CDX79734 Canola golgi, plasma membrane, vacuole 42.17 46.13
CDX91365 Canola plasma membrane 43.94 45.79
CDX74958 Canola plasma membrane 43.94 45.79
CDY29141 Canola plasma membrane 43.43 44.91
CDX75163 Canola plasma membrane 43.43 44.79
CDX70003 Canola plasma membrane 44.19 43.86
CDX76001 Canola plasma membrane 40.15 42.74
CDY68855 Canola plasma membrane 40.4 42.67
CDX79964 Canola plasma membrane 42.42 42.64
CDY53669 Canola plasma membrane 42.42 42.64
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 40.15 42.51
CDY09817 Canola plasma membrane 36.87 42.32
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 39.9 42.25
CDX94896 Canola plasma membrane 39.39 42.16
CDY06954 Canola plasma membrane 40.91 41.86
CDY68060 Canola plasma membrane 40.4 41.34
CDY14752 Canola plasma membrane 40.4 41.34
CDY56779 Canola plasma membrane 39.14 41.11
CDY35431 Canola plasma membrane 40.66 40.97
CDX72122 Canola plasma membrane 38.13 40.27
CDY63536 Canola plasma membrane 33.33 39.64
CDY65991 Canola plasma membrane 37.12 38.89
CDX85633 Canola plasma membrane 36.87 38.52
CDX91104 Canola plasma membrane 36.87 38.52
CDY51934 Canola plasma membrane 26.01 34.92
CDX75960 Canola plasma membrane 26.01 34.92
CDX99013 Canola golgi, plasma membrane, vacuole 13.64 34.62
CDX93689 Canola plasma membrane 30.56 33.61
CDY40602 Canola plasma membrane 25.25 33.44
CDX95542 Canola plasma membrane 25.76 33.44
CDY18510 Canola plasma membrane 30.05 33.06
CDY45218 Canola plasma membrane 30.56 32.35
CDX68127 Canola plasma membrane 30.3 31.09
CDX85897 Canola plasma membrane 30.3 30.93
CDY47518 Canola golgi, plasma membrane, vacuole 29.8 30.41
CDY64209 Canola golgi, plasma membrane, vacuole 29.8 30.41
CDY20378 Canola plasma membrane 29.29 30.05
CDY65383 Canola golgi, plasma membrane, vacuole 18.69 29.25
CDX86054 Canola plasma membrane 28.28 29.17
CDX99139 Canola plasma membrane 28.28 29.17
CDY39037 Canola golgi, plasma membrane, vacuole 21.97 28.16
CDY09279 Canola plasma membrane 28.28 28.14
CDX76488 Canola plasma membrane 28.03 27.89
CDY23124 Canola plasma membrane 26.77 27.68
CDY23125 Canola plasma membrane 26.77 27.6
CDY13057 Canola plasma membrane 26.52 27.34
CDY13056 Canola plasma membrane 26.01 26.89
CDX78925 Canola plasma membrane 25.25 25.51
CDX99393 Canola mitochondrion 27.78 22.09
Protein Annotations
MapMan:24.2.1.5GO:A0A078ES06EnsemblPlants:CDY04680ProteinID:CDY04680ProteinID:CDY04680.1InterPro:EamA_dom
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857EnsemblPlantsGene:GSBRNA2T00119288001PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF12
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EE6D2EInterPro:WAT1-relatedSEG:seg:
Description
BnaC05g17180D
Coordinates
chrLK031956:-:802881..805166
Molecular Weight (calculated)
42799.1 Da
IEP (calculated)
9.819
GRAVY (calculated)
0.462
Length
396 amino acids
Sequence
(BLAST)
001: MESEKMWGSL MNRVKPYLAM ISMQFGYAGM YIITMVSLKH GMNHYILAVY RHAIATVVIA PFALFHERKI RPKMTFRIFL QIALLGFIEP VLDQNLYYVG
101: MTYTSATFAS ATANVLPAIT FVLAIIFRLE SVNFKKVRSI AKVVGTVITV SGALLMTLYK GPIIDFIKFG SGGGGDDGAG GGSHGGAASA DLDKHWIPGT
201: LMLLGRTFGW AGFFILQSFT LKKYPAELSL TALICLMGTL EGTAVSLVTV RDLSAWKIGF DSNLFAAAYS GVICSGVAYY VQGVVMRERG PVFVATFNPL
301: CVVITAALGV VVLSESIHLG SVIGTIFIIA GLYTVVWGKG KDKRMTDDDK ISKRLPVKSP VKPVVAGKGL AGEPEMKTKQ GQETNKATEL EGDVFI
Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)
001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI
Arabidopsis Description
WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.