Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18443 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 97.86 | 97.86 |
| Bra017185.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 97.06 | 97.06 |
| AT2G37450.2 | Thale cress | extracellular, golgi, vacuole | 70.05 | 77.98 |
| CDX91365 | Canola | plasma membrane | 77.54 | 76.32 |
| CDX74958 | Canola | plasma membrane | 77.54 | 76.32 |
| CDX93378 | Canola | cytosol, plasma membrane, vacuole | 75.94 | 76.14 |
| CDY18444 | Canola | plasma membrane | 75.67 | 75.87 |
| CDY07788 | Canola | golgi, plasma membrane, vacuole | 73.26 | 75.69 |
| CDX79734 | Canola | golgi, plasma membrane, vacuole | 72.99 | 75.41 |
| CDX79735 | Canola | golgi, plasma membrane, vacuole | 56.95 | 75.27 |
| PGSC0003DMT400022827 | Potato | golgi, plasma membrane, vacuole | 56.42 | 56.27 |
| Solyc09g010360.2.1 | Tomato | golgi, plasma membrane, vacuole | 56.42 | 56.27 |
| KRH67559 | Soybean | plasma membrane | 56.42 | 55.97 |
| KRH32320 | Soybean | plasma membrane | 55.35 | 54.62 |
| KRH19731 | Soybean | cytosol | 55.35 | 54.62 |
| KRG95827 | Soybean | plasma membrane | 55.88 | 54.57 |
| VIT_08s0040g02500.t01 | Wine grape | plasma membrane, vacuole | 55.88 | 51.99 |
| CDY07016 | Canola | plasma membrane | 49.47 | 49.2 |
| CDX93255 | Canola | plasma membrane | 49.2 | 48.94 |
| CDY20446 | Canola | plasma membrane | 48.4 | 48.27 |
| CDY53594 | Canola | plasma membrane | 48.4 | 48.27 |
| Solyc12g098280.1.1 | Tomato | extracellular, golgi | 33.96 | 45.04 |
| PGSC0003DMT400095497 | Potato | plasma membrane | 25.94 | 44.91 |
| CDY09817 | Canola | plasma membrane | 41.18 | 44.64 |
| CDY29141 | Canola | plasma membrane | 43.05 | 42.04 |
| CDY00403 | Canola | plasma membrane | 42.51 | 41.95 |
| CDY49560 | Canola | golgi, plasma membrane, vacuole | 41.71 | 41.82 |
| CDX91104 | Canola | plasma membrane | 42.25 | 41.69 |
| CDX75163 | Canola | plasma membrane | 42.78 | 41.67 |
| CDY63388 | Canola | golgi, plasma membrane, vacuole | 41.44 | 41.55 |
| CDY65991 | Canola | plasma membrane | 41.98 | 41.53 |
| CDX85633 | Canola | plasma membrane | 41.71 | 41.16 |
| CDX99012 | Canola | plasma membrane | 24.6 | 41.07 |
| CDX70003 | Canola | plasma membrane | 43.32 | 40.6 |
| CDY01310 | Canola | plasma membrane | 41.98 | 40.46 |
| CDY04680 | Canola | plasma membrane | 42.25 | 39.9 |
| CDY22493 | Canola | plasma membrane | 21.39 | 38.84 |
| CDY06954 | Canola | plasma membrane | 40.11 | 38.76 |
| CDY68060 | Canola | plasma membrane | 39.57 | 38.24 |
| CDY68855 | Canola | plasma membrane | 38.24 | 38.13 |
| CDY14752 | Canola | plasma membrane | 39.3 | 37.98 |
| CDX99013 | Canola | golgi, plasma membrane, vacuole | 15.78 | 37.82 |
| CDY53669 | Canola | plasma membrane | 39.84 | 37.82 |
| CDY14996 | Canola | plasma membrane | 38.5 | 37.7 |
| CDY12554 | Canola | plasma membrane | 38.5 | 37.7 |
| CDX79964 | Canola | plasma membrane | 39.3 | 37.31 |
| CDX94896 | Canola | plasma membrane | 36.63 | 37.03 |
| CDX76001 | Canola | plasma membrane | 36.63 | 36.83 |
| CDY35431 | Canola | plasma membrane | 38.5 | 36.64 |
| CDX72122 | Canola | plasma membrane | 36.1 | 36.0 |
| CDY56779 | Canola | plasma membrane | 35.83 | 35.54 |
| CDY63536 | Canola | plasma membrane | 31.02 | 34.83 |
| CDX75960 | Canola | plasma membrane | 27.01 | 34.24 |
| CDY51934 | Canola | plasma membrane | 27.01 | 34.24 |
| CDX95542 | Canola | plasma membrane | 27.27 | 33.44 |
| CDY40602 | Canola | plasma membrane | 25.67 | 32.11 |
| CDY18510 | Canola | plasma membrane | 30.48 | 31.67 |
| CDX93689 | Canola | plasma membrane | 30.21 | 31.39 |
| CDX85897 | Canola | plasma membrane | 30.75 | 29.64 |
| CDY47518 | Canola | golgi, plasma membrane, vacuole | 30.48 | 29.38 |
| CDY64209 | Canola | golgi, plasma membrane, vacuole | 30.48 | 29.38 |
| CDX68127 | Canola | plasma membrane | 30.21 | 29.27 |
| CDY39037 | Canola | golgi, plasma membrane, vacuole | 23.8 | 28.8 |
| CDY20378 | Canola | plasma membrane | 29.68 | 28.76 |
| CDX99139 | Canola | plasma membrane | 28.61 | 27.86 |
| CDY23125 | Canola | plasma membrane | 28.34 | 27.6 |
| CDX86054 | Canola | plasma membrane | 28.34 | 27.6 |
| CDY13057 | Canola | plasma membrane | 27.81 | 27.08 |
| CDY45218 | Canola | plasma membrane | 26.74 | 26.74 |
| CDY13056 | Canola | plasma membrane | 26.74 | 26.11 |
| CDY23124 | Canola | plasma membrane | 26.47 | 25.85 |
| CDY09279 | Canola | plasma membrane | 27.01 | 25.38 |
| CDY65383 | Canola | golgi, plasma membrane, vacuole | 16.84 | 24.9 |
| CDX76488 | Canola | plasma membrane | 25.94 | 24.37 |
| CDX78925 | Canola | plasma membrane | 24.6 | 23.47 |
| CDX99393 | Canola | mitochondrion | 25.94 | 19.48 |
Protein Annotations
| EnsemblPlants:CDX93377 | EnsemblPlantsGene:GSBRNA2T00155362001 | GO:A0A078DWT6 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF29 | PFAM:PF00892 | ProteinID:CDX93377 | ProteinID:CDX93377.1 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EEEEC1 | MapMan:24.2.1.5 | : | : |
Description
BnaC04g45190D
Coordinates
chrLK031875:+:1383470..1386248
Molecular Weight (calculated)
40760.1 Da
IEP (calculated)
8.974
GRAVY (calculated)
0.586
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVKKISCM KKAMPFILVI LLQVGLAGMD ILTKAVLNEG MSNYVLVVYR HGVAAIIMAP FAFYFDKAAR PKMTPMIFFK ITLLGLFEPV IDQNLFCLGM
101: KYTTATFATA LYNTLPAVTF ILALIVRLEK VKLRSMRSAS KVIGTMASVG GTMIMTLVKG PALDLFWTKG PSAQNTTGTD IHSSIKGAVL VTIGCFSYAC
201: FFILYAITLK IYPTELSLTA WICLMGTLEG AAVALVMERG NPGAWAIGWD NKLLTVTYSG IVCSALGYYI GGLVMKTRGP VFVTAFSPLC MIVVAFMSSI
301: IFAEQMYLGR ALGAAVICAG LYLVIWGKGN DYKDASTNPT QTKLELIGNE KDSVGHEIIN IRKEEEQRTV VETV
101: KYTTATFATA LYNTLPAVTF ILALIVRLEK VKLRSMRSAS KVIGTMASVG GTMIMTLVKG PALDLFWTKG PSAQNTTGTD IHSSIKGAVL VTIGCFSYAC
201: FFILYAITLK IYPTELSLTA WICLMGTLEG AAVALVMERG NPGAWAIGWD NKLLTVTYSG IVCSALGYYI GGLVMKTRGP VFVTAFSPLC MIVVAFMSSI
301: IFAEQMYLGR ALGAAVICAG LYLVIWGKGN DYKDASTNPT QTKLELIGNE KDSVGHEIIN IRKEEEQRTV VETV
001: MACMKKALPF ILMVLLQIGY AGMDILTKDV LNKGMSIYVL SVYRHGVATV VMAPFAFYFD NPVIAQNLFN LGMKYTTATF AIALYNTLPA VTFILALIFR
101: LESVKFQSIR SAAKVVGTVT TVGGIMVMTL VKGPALDLFW TKGPSAQNTV GTDIHSSIKG AVLVTIGCFS YACFMILQAI TLKTYPAELS LATWICLIGT
201: IEGVVVALVM EKGNPSVWAI GWDTKLLTIT YSGIVCSALG YYIGGVVMKT RGPVFVTAFK PLCMIVVAIM SSIIFDEQMY LGRALGATVI CVGLYLVIWG
301: KAKDYEYPST PQIDDDLAQA TTSKQKEQRR TVIESV
101: LESVKFQSIR SAAKVVGTVT TVGGIMVMTL VKGPALDLFW TKGPSAQNTV GTDIHSSIKG AVLVTIGCFS YACFMILQAI TLKTYPAELS LATWICLIGT
201: IEGVVVALVM EKGNPSVWAI GWDTKLLTIT YSGIVCSALG YYIGGVVMKT RGPVFVTAFK PLCMIVVAIM SSIIFDEQMY LGRALGATVI CVGLYLVIWG
301: KAKDYEYPST PQIDDDLAQA TTSKQKEQRR TVIESV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178W1D2]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.