Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 6
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18443 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 78.87 | 70.86 |
| Bra017185.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 78.27 | 70.32 |
| CDX93377 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 77.98 | 70.05 |
| AT2G37460.1 | Thale cress | cytosol, plasma membrane, vacuole | 79.17 | 70.0 |
| KRH67559 | Soybean | plasma membrane | 59.82 | 53.32 |
| Solyc09g010360.2.1 | Tomato | golgi, plasma membrane, vacuole | 58.93 | 52.8 |
| KRG95827 | Soybean | plasma membrane | 60.12 | 52.74 |
| PGSC0003DMT400022827 | Potato | golgi, plasma membrane, vacuole | 58.63 | 52.53 |
| KRH19731 | Soybean | cytosol | 57.44 | 50.92 |
| KRH32320 | Soybean | plasma membrane | 56.85 | 50.4 |
| VIT_08s0040g02500.t01 | Wine grape | plasma membrane, vacuole | 59.23 | 49.5 |
| AT2G39510.1 | Thale cress | plasma membrane | 52.08 | 46.79 |
| Solyc12g098280.1.1 | Tomato | extracellular, golgi | 34.52 | 41.13 |
| PGSC0003DMT400095497 | Potato | plasma membrane | 26.19 | 40.74 |
| AT1G44800.1 | Thale cress | plasma membrane | 44.35 | 40.27 |
| AT1G21890.1 | Thale cress | plasma membrane | 45.83 | 39.59 |
| AT5G13670.1 | Thale cress | plasma membrane | 43.45 | 38.73 |
| AT4G08300.1 | Thale cress | plasma membrane | 42.86 | 38.61 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 45.83 | 38.31 |
| AT4G08290.1 | Thale cress | plasma membrane | 43.45 | 38.02 |
| AT2G40900.1 | Thale cress | plasma membrane | 39.88 | 34.01 |
| AT3G56620.1 | Thale cress | plasma membrane | 37.5 | 33.42 |
| AT4G24980.1 | Thale cress | plasma membrane | 24.11 | 30.0 |
| AT3G18200.2 | Thale cress | plasma membrane | 33.93 | 29.77 |
| AT1G75500.1 | Thale cress | plasma membrane | 30.95 | 26.74 |
| AT3G53210.1 | Thale cress | plasma membrane | 28.87 | 26.29 |
| AT3G45870.1 | Thale cress | plasma membrane | 27.98 | 24.42 |
| AT5G45370.2 | Thale cress | plasma membrane | 26.49 | 23.36 |
| AT4G19185.1 | Thale cress | plasma membrane | 27.08 | 22.86 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:818322 | UniProt:A0A178W1D2 | ProteinID:AAC98071.2 | ProteinID:AEC09401.1 | ProteinID:AEC09402.1 |
| EMBL:AK228198 | ProteinID:ANM61868.1 | ArrayExpress:AT2G37450 | EnsemblPlantsGene:AT2G37450 | RefSeq:AT2G37450 | TAIR:AT2G37450 |
| RefSeq:AT2G37450-TAIR-G | EnsemblPlants:AT2G37450.2 | TAIR:AT2G37450.2 | EMBL:AY044325 | Unigene:At.25380 | ncoils:Coil |
| InterPro:EamA_dom | UniProt:F4IQX1 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0032973 | GO:GO:0043090 | GO:GO:0055085 | GO:GO:0080144 |
| RefSeq:NP_001078016.1 | RefSeq:NP_001324060.1 | RefSeq:NP_565861.1 | ProteinID:OAP11499.1 | ProteinID:OAP11501.1 | PFAM:PF00892 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF29 |
| SUPFAM:SSF103481 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0001505711 | InterPro:WAT1-related | SEG:seg |
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178W1D2]
Coordinates
chr2:-:15722548..15725022
Molecular Weight (calculated)
36527.7 Da
IEP (calculated)
8.933
GRAVY (calculated)
0.682
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MACMKKALPF ILMVLLQIGY AGMDILTKDV LNKGMSIYVL SVYRHGVATV VMAPFAFYFD NPVIAQNLFN LGMKYTTATF AIALYNTLPA VTFILALIFR
101: LESVKFQSIR SAAKVVGTVT TVGGIMVMTL VKGPALDLFW TKGPSAQNTV GTDIHSSIKG AVLVTIGCFS YACFMILQAI TLKTYPAELS LATWICLIGT
201: IEGVVVALVM EKGNPSVWAI GWDTKLLTIT YSGIVCSALG YYIGGVVMKT RGPVFVTAFK PLCMIVVAIM SSIIFDEQMY LGRALGATVI CVGLYLVIWG
301: KAKDYEYPST PQIDDDLAQA TTSKQKEQRR TVIESV
101: LESVKFQSIR SAAKVVGTVT TVGGIMVMTL VKGPALDLFW TKGPSAQNTV GTDIHSSIKG AVLVTIGCFS YACFMILQAI TLKTYPAELS LATWICLIGT
201: IEGVVVALVM EKGNPSVWAI GWDTKLLTIT YSGIVCSALG YYIGGVVMKT RGPVFVTAFK PLCMIVVAIM SSIIFDEQMY LGRALGATVI CVGLYLVIWG
301: KAKDYEYPST PQIDDDLAQA TTSKQKEQRR TVIESV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.