Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017186.1-P | Field mustard | plasma membrane | 88.16 | 90.54 |
| CDX93378 | Canola | cytosol, plasma membrane, vacuole | 88.42 | 90.08 |
| Bra005193.1-P | Field mustard | plasma membrane | 90.0 | 90.0 |
| CDX74958 | Canola | plasma membrane | 90.0 | 90.0 |
| CDX91365 | Canola | plasma membrane | 90.0 | 90.0 |
| CDY18444 | Canola | plasma membrane | 87.63 | 89.28 |
| CDY07788 | Canola | golgi, plasma membrane, vacuole | 84.21 | 88.4 |
| Bra000002.1-P | Field mustard | golgi, plasma membrane, vacuole | 83.95 | 88.12 |
| CDX79734 | Canola | golgi, plasma membrane, vacuole | 83.95 | 88.12 |
| CDX79735 | Canola | golgi, plasma membrane, vacuole | 64.47 | 86.57 |
| AT2G37450.2 | Thale cress | extracellular, golgi, vacuole | 70.0 | 79.17 |
| KRH67559 | Soybean | plasma membrane | 61.58 | 62.07 |
| KRG95827 | Soybean | plasma membrane | 61.32 | 60.84 |
| PGSC0003DMT400022827 | Potato | golgi, plasma membrane, vacuole | 59.74 | 60.53 |
| Solyc09g010360.2.1 | Tomato | golgi, plasma membrane, vacuole | 59.47 | 60.27 |
| KRH19731 | Soybean | cytosol | 59.74 | 59.89 |
| KRH32320 | Soybean | plasma membrane | 58.68 | 58.84 |
| VIT_08s0040g02500.t01 | Wine grape | plasma membrane, vacuole | 61.58 | 58.21 |
| AT2G39510.1 | Thale cress | plasma membrane | 52.11 | 52.94 |
| PGSC0003DMT400095497 | Potato | plasma membrane | 27.63 | 48.61 |
| Solyc12g098280.1.1 | Tomato | extracellular, golgi | 35.26 | 47.52 |
| AT1G21890.1 | Thale cress | plasma membrane | 47.11 | 46.02 |
| AT5G13670.1 | Thale cress | plasma membrane | 43.68 | 44.03 |
| AT1G44800.1 | Thale cress | plasma membrane | 42.37 | 43.51 |
| AT4G08290.1 | Thale cress | plasma membrane | 43.95 | 43.49 |
| AT4G08300.1 | Thale cress | plasma membrane | 42.63 | 43.43 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 45.26 | 42.79 |
| AT2G40900.1 | Thale cress | plasma membrane | 42.89 | 41.37 |
| AT3G56620.1 | Thale cress | plasma membrane | 40.0 | 40.32 |
| AT3G18200.2 | Thale cress | plasma membrane | 32.89 | 32.64 |
| AT4G24980.1 | Thale cress | plasma membrane | 22.37 | 31.48 |
| AT1G75500.1 | Thale cress | plasma membrane | 31.58 | 30.85 |
| AT3G53210.1 | Thale cress | plasma membrane | 28.95 | 29.81 |
| AT3G45870.1 | Thale cress | plasma membrane | 27.37 | 27.01 |
| AT5G45370.2 | Thale cress | plasma membrane | 26.84 | 26.77 |
| AT4G19185.1 | Thale cress | plasma membrane | 26.32 | 25.13 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:818323 | ProteinID:AAC98072.1 | ProteinID:AEC09403.1 | ArrayExpress:AT2G37460 | EnsemblPlantsGene:AT2G37460 |
| RefSeq:AT2G37460 | TAIR:AT2G37460 | RefSeq:AT2G37460-TAIR-G | EnsemblPlants:AT2G37460.1 | TAIR:AT2G37460.1 | EMBL:AY035102 |
| EMBL:AY044320 | EMBL:AY063035 | EMBL:AY085629 | InterPro:EamA_dom | GO:GO:0003333 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0032973 | GO:GO:0043090 |
| GO:GO:0055085 | GO:GO:0080144 | RefSeq:NP_181282.1 | PFAM:PF00892 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31218 |
| PANTHER:PTHR31218:SF29 | UniProt:Q9ZUS1 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI00000A10EB | InterPro:WAT1-related |
Description
WAT1-related protein At2g37460 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS1]
Coordinates
chr2:-:15726338..15729170
Molecular Weight (calculated)
41533.9 Da
IEP (calculated)
9.205
GRAVY (calculated)
0.532
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVKKRDCM EKARPFISMV VLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATIVMAP FAFYFDKKVR PKMTLMIFFK ISLLGLLEPV IDQNLYYLGM
101: KYTTATFATA MYNVLPAITF VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLFWTKG VSAHNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAITLR TYPAELSLTA WICLMGTIEG TAVALVMEKG NPSAWAIGWD TKLLTATYSG IVCSALAYYV GGVVMKTRGP VFVTAFSPLC MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKGK DYKYNSTLQL DDESAQPKLE LSGNGKDNVD HEVITISKQG EQRRTAVETV
101: KYTTATFATA MYNVLPAITF VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLFWTKG VSAHNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAITLR TYPAELSLTA WICLMGTIEG TAVALVMEKG NPSAWAIGWD TKLLTATYSG IVCSALAYYV GGVVMKTRGP VFVTAFSPLC MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKGK DYKYNSTLQL DDESAQPKLE LSGNGKDNVD HEVITISKQG EQRRTAVETV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.