Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51934 | Canola | plasma membrane | 72.06 | 93.56 |
| CDX95542 | Canola | plasma membrane | 74.15 | 93.11 |
| CDX75960 | Canola | plasma membrane | 71.28 | 92.54 |
| Bra001699.1-P | Field mustard | plasma membrane | 83.03 | 90.6 |
| CDY18510 | Canola | plasma membrane | 84.86 | 90.28 |
| Bra021301.1-P | Field mustard | plasma membrane | 84.33 | 89.72 |
| KRH48595 | Soybean | endoplasmic reticulum, plasma membrane | 63.19 | 67.41 |
| KRH39121 | Soybean | plasma membrane | 62.92 | 67.13 |
| VIT_17s0000g03050.t01 | Wine grape | plasma membrane | 63.71 | 67.03 |
| PGSC0003DMT400014719 | Potato | plasma membrane | 62.4 | 66.57 |
| Solyc03g118900.1.1 | Tomato | plasma membrane | 61.62 | 65.74 |
| GSMUA_Achr10P... | Banana | plasma membrane | 55.61 | 58.84 |
| TraesCS3A01G019600.1 | Wheat | plasma membrane | 56.14 | 58.27 |
| GSMUA_Achr6P09500_001 | Banana | golgi, plasma membrane | 54.83 | 58.17 |
| TraesCS3B01G026700.1 | Wheat | plasma membrane | 55.87 | 57.99 |
| Os01t0117900-02 | Rice | plasma membrane | 56.14 | 57.49 |
| TraesCS3D01G027300.1 | Wheat | plasma membrane | 55.87 | 57.37 |
| EES02603 | Sorghum | plasma membrane | 55.87 | 57.07 |
| Os02t0331400-00 | Rice | plasma membrane | 49.09 | 56.63 |
| Zm00001d040089_P001 | Maize | extracellular, golgi, plasma membrane | 54.31 | 56.52 |
| HORVU3Hr1G002710.4 | Barley | plasma membrane | 57.44 | 54.46 |
| AT1G75500.1 | Thale cress | plasma membrane | 54.05 | 53.21 |
| KXG19264 | Sorghum | plasma membrane | 44.91 | 47.78 |
| Zm00001d036123_P002 | Maize | plasma membrane | 44.39 | 47.49 |
| AT3G53210.1 | Thale cress | plasma membrane | 40.99 | 42.55 |
| AT3G45870.1 | Thale cress | plasma membrane | 34.2 | 34.03 |
| AT2G37450.2 | Thale cress | extracellular, golgi, vacuole | 29.77 | 33.93 |
| AT2G39510.1 | Thale cress | plasma membrane | 32.9 | 33.69 |
| AT2G37460.1 | Thale cress | cytosol, plasma membrane, vacuole | 32.64 | 32.89 |
| AT4G08290.1 | Thale cress | plasma membrane | 32.64 | 32.55 |
| AT5G13670.1 | Thale cress | plasma membrane | 31.33 | 31.83 |
| AT4G19185.1 | Thale cress | plasma membrane | 32.9 | 31.66 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 32.9 | 31.34 |
| AT1G44800.1 | Thale cress | plasma membrane | 29.5 | 30.54 |
| AT2G40900.1 | Thale cress | plasma membrane | 31.33 | 30.46 |
| AT3G56620.1 | Thale cress | plasma membrane | 29.77 | 30.24 |
| AT5G45370.2 | Thale cress | plasma membrane | 30.03 | 30.18 |
| AT4G08300.1 | Thale cress | plasma membrane | 29.24 | 30.03 |
| AT1G21890.1 | Thale cress | plasma membrane | 30.29 | 29.82 |
| AT4G24980.1 | Thale cress | plasma membrane | 20.1 | 28.52 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:821347 | ProteinID:AEE76063.2 | ArrayExpress:AT3G18200 | EnsemblPlantsGene:AT3G18200 | RefSeq:AT3G18200 |
| TAIR:AT3G18200 | RefSeq:AT3G18200-TAIR-G | EnsemblPlants:AT3G18200.2 | TAIR:AT3G18200.2 | ProteinID:BAB02033.1 | EMBL:BX824196 |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| RefSeq:NP_188448.2 | PFAM:PF00892 | PO:PO:0009005 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF62 | UniProt:Q9LV20 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI00000A0768 | InterPro:WAT1-related | SEG:seg | : |
Description
WAT1-related protein At3g18200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV20]
Coordinates
chr3:-:6234509..6236139
Molecular Weight (calculated)
42848.2 Da
IEP (calculated)
9.330
GRAVY (calculated)
0.454
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MCYQTSKKKR RSRKRRAQEE KEKMGKGVVS EKVKLVVALI TLQFCFAGFH IVSRVALNIG VSKVVYPVYR NLLALLLIGP FAYFFEKKER PPLTISLLAQ
101: FFFLALIGIT ANQGFYLLGL YYATPTFASA MQNSVPAITF IMACALRLEH IDLVRKHGVA KVLGTLVSIG GATVITLYRG FPIFDQGLNM QKEEVVGSDN
201: SHSLTLGWLY LMGHCLSWAG WMVLQAPVLK QYPAKLTLTS FTCFFGLIQF LVIALFVETD LNNWIIVSWE ELFTILYAGI IASGLVVYLQ TWCIYKSGPV
301: FVAVFQPLQT LLVAAMAFLI LGDQLYSGGI VGAVFIMLGL YLVLWGKNEE RKLALEESQQ DPESLTKHLL EAQHKKSNSE SEV
101: FFFLALIGIT ANQGFYLLGL YYATPTFASA MQNSVPAITF IMACALRLEH IDLVRKHGVA KVLGTLVSIG GATVITLYRG FPIFDQGLNM QKEEVVGSDN
201: SHSLTLGWLY LMGHCLSWAG WMVLQAPVLK QYPAKLTLTS FTCFFGLIQF LVIALFVETD LNNWIIVSWE ELFTILYAGI IASGLVVYLQ TWCIYKSGPV
301: FVAVFQPLQT LLVAAMAFLI LGDQLYSGGI VGAVFIMLGL YLVLWGKNEE RKLALEESQQ DPESLTKHLL EAQHKKSNSE SEV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.