Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64209 | Canola | golgi, plasma membrane, vacuole | 95.89 | 96.13 |
| Bra015839.1-P | Field mustard | golgi, plasma membrane, vacuole | 95.37 | 95.62 |
| CDX85897 | Canola | plasma membrane | 95.12 | 95.36 |
| CDY47518 | Canola | golgi, plasma membrane, vacuole | 95.12 | 95.36 |
| Bra003751.1-P | Field mustard | plasma membrane | 94.34 | 95.08 |
| Bra008201.1-P | Field mustard | plasma membrane | 95.12 | 94.87 |
| CDX68127 | Canola | plasma membrane | 94.09 | 94.82 |
| CDY20378 | Canola | plasma membrane | 91.26 | 91.97 |
| CDY39037 | Canola | golgi, plasma membrane, vacuole | 72.49 | 91.26 |
| VIT_18s0001g13360.t01 | Wine grape | plasma membrane | 77.12 | 78.33 |
| KRH51770 | Soybean | plasma membrane | 77.38 | 77.38 |
| KRH61091 | Soybean | plasma membrane | 76.61 | 76.8 |
| GSMUA_Achr1P06750_001 | Banana | golgi, plasma membrane, vacuole | 62.98 | 76.32 |
| KRH17381 | Soybean | plasma membrane | 75.58 | 75.58 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 64.01 | 75.23 |
| Solyc04g080940.2.1 | Tomato | extracellular, plasma membrane | 74.29 | 75.06 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 74.29 | 74.68 |
| KRH05893 | Soybean | plasma membrane | 75.06 | 74.11 |
| PGSC0003DMT400009630 | Potato | plasma membrane | 75.06 | 73.92 |
| TraesCS3A01G007100.1 | Wheat | golgi, plasma membrane, vacuole | 72.24 | 73.37 |
| TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 72.24 | 72.42 |
| TraesCS3B01G006900.1 | Wheat | plasma membrane | 72.24 | 72.05 |
| Zm00001d049916_P001 | Maize | golgi, plasma membrane, vacuole | 72.49 | 71.94 |
| TraesCS3B01G011600.1 | Wheat | plasma membrane | 71.47 | 71.1 |
| Os08t0561500-01 | Rice | plasma membrane | 70.69 | 71.06 |
| EES15167 | Sorghum | plasma membrane | 72.49 | 70.32 |
| TraesCS7D01G280200.1 | Wheat | plasma membrane | 61.18 | 69.19 |
| Zm00001d031913_P003 | Maize | plasma membrane | 71.21 | 68.23 |
| TraesCS7A01G281700.1 | Wheat | plasma membrane | 53.21 | 66.56 |
| AT3G53210.1 | Thale cress | plasma membrane | 51.67 | 54.47 |
| HORVU3Hr1G001040.3 | Barley | golgi, peroxisome | 58.61 | 54.16 |
| AT3G18200.2 | Thale cress | plasma membrane | 53.21 | 54.05 |
| AT2G39510.1 | Thale cress | plasma membrane | 33.42 | 34.76 |
| AT3G45870.1 | Thale cress | plasma membrane | 33.68 | 34.03 |
| AT4G08290.1 | Thale cress | plasma membrane | 32.9 | 33.33 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 34.45 | 33.33 |
| AT4G24980.1 | Thale cress | plasma membrane | 22.11 | 31.85 |
| AT5G45370.2 | Thale cress | plasma membrane | 31.11 | 31.76 |
| AT2G40900.1 | Thale cress | plasma membrane | 32.13 | 31.73 |
| AT4G19185.1 | Thale cress | plasma membrane | 32.39 | 31.66 |
| AT2G37460.1 | Thale cress | cytosol, plasma membrane, vacuole | 30.85 | 31.58 |
| AT2G37450.2 | Thale cress | extracellular, golgi, vacuole | 26.74 | 30.95 |
| AT5G13670.1 | Thale cress | plasma membrane | 29.82 | 30.77 |
| AT1G21890.1 | Thale cress | plasma membrane | 30.33 | 30.33 |
| AT1G44800.1 | Thale cress | plasma membrane | 28.53 | 30.0 |
| AT4G08300.1 | Thale cress | plasma membrane | 28.53 | 29.76 |
| AT3G56620.1 | Thale cress | plasma membrane | 28.28 | 29.18 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:843886 | UniProt:A0A178WFC0 | ProteinID:AAF87121.1 | EMBL:AC023754 | ProteinID:AEE35726.1 |
| ProteinID:AEE35727.1 | EMBL:AK226453 | EMBL:AK229900 | ArrayExpress:AT1G75500 | EnsemblPlantsGene:AT1G75500 | RefSeq:AT1G75500 |
| TAIR:AT1G75500 | RefSeq:AT1G75500-TAIR-G | EnsemblPlants:AT1G75500.1 | TAIR:AT1G75500.1 | EMBL:AY045896 | EMBL:AY091450 |
| Unigene:At.21884 | EMBL:BT000668 | InterPro:EamA_dom | GO:GO:0000162 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 | GO:GO:0009073 | GO:GO:0009653 |
| GO:GO:0009705 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009826 | GO:GO:0009834 | GO:GO:0009851 |
| GO:GO:0009987 | GO:GO:0010315 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0022857 | GO:GO:0040007 | GO:GO:0055085 | GO:GO:0071555 | GO:GO:0090355 | GO:GO:0090358 |
| RefSeq:NP_001185403.1 | RefSeq:NP_565111.1 | ProteinID:OAP16824.1 | PFAM:PF00892 | PO:PO:0000003 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000274 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0002003 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31218 |
| PANTHER:PTHR31218:SF53 | UniProt:Q94AP3 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI00000ABFBC | Symbol:WAT1 |
| InterPro:WAT1-related | SEG:seg | : | : | : | : |
Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
Coordinates
chr1:-:28337768..28340241
Molecular Weight (calculated)
42573.4 Da
IEP (calculated)
9.251
GRAVY (calculated)
0.566
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.