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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G331000.1
TraesCS2A01G368500.1
TraesCS2B01G351300.1
TraesCS2B01G385700.2
TraesCS2D01G332000.1
TraesCS2D01G365300.2
TraesCS5A01G257000.1
TraesCS5B01G256500.1
TraesCS5D01G265600.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G240200.1
TraesCS7A01G300700.1
TraesCS7B01G135800.1
TraesCS7D01G238200.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75500.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT1G75500.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT1G75500.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT1G75500.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT1G75500.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT1G75500.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT1G75500.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT1G75500.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
AT1G75500.1 TraesCS2A01G331000.1 AT4G26455.1 21798944
AT1G75500.1 TraesCS2B01G351300.1 AT4G26455.1 21798944
AT1G75500.1 TraesCS2D01G332000.1 AT4G26455.1 21798944
AT1G75500.1 TraesCS5A01G257000.1 AT4G26455.1 21798944
AT1G75500.1 TraesCS5B01G256500.1 AT4G26455.1 21798944
AT1G75500.1 TraesCS5D01G265600.1 AT4G26455.1 21798944
AT1G75500.1 TraesCS7A01G240200.1 AT4G26455.1 21798944
AT1G75500.1 TraesCS7B01G135800.1 AT4G26455.1 21798944
AT1G75500.1 TraesCS7D01G238200.1 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G003600.1 Wheat golgi, plasma membrane, vacuole 87.21 77.32
TraesCS7A01G281700.1 Wheat plasma membrane 69.77 77.17
Zm00001d049916_P001 Maize golgi, plasma membrane, vacuole 79.36 69.64
Os08t0561500-01 Rice plasma membrane 77.91 69.25
EES15167 Sorghum plasma membrane 79.65 68.33
Zm00001d031913_P003 Maize plasma membrane 79.07 67.0
GSMUA_Achr1P06750_001 Banana golgi, plasma membrane, vacuole 60.76 65.11
GSMUA_AchrUn_... Banana golgi, plasma membrane, vacuole 62.5 64.95
GSMUA_AchrUn_... Banana plasma membrane 72.97 64.86
AT1G75500.1 Thale cress plasma membrane 69.19 61.18
KRH51770 Soybean plasma membrane 68.9 60.93
Bra003751.1-P Field mustard plasma membrane 68.02 60.62
CDX68127 Canola plasma membrane 68.02 60.62
VIT_18s0001g13360.t01 Wine grape plasma membrane 67.44 60.57
Bra008201.1-P Field mustard plasma membrane 68.6 60.51
KRH17381 Soybean plasma membrane 68.31 60.41
CDY47518 Canola golgi, plasma membrane, vacuole 68.02 60.31
Bra015839.1-P Field mustard golgi, plasma membrane, vacuole 68.02 60.31
CDX85897 Canola plasma membrane 68.02 60.31
CDY64209 Canola golgi, plasma membrane, vacuole 68.02 60.31
KRH61091 Soybean plasma membrane 68.02 60.31
Solyc04g080940.2.1 Tomato extracellular, plasma membrane 67.15 60.0
KRH05893 Soybean plasma membrane 67.73 59.14
CDY39037 Canola golgi, plasma membrane, vacuole 52.91 58.9
CDY20378 Canola plasma membrane 65.99 58.81
PGSC0003DMT400009630 Potato plasma membrane 66.86 58.23
HORVU3Hr1G001040.3 Barley golgi, peroxisome 64.83 52.97
TraesCS3D01G027300.1 Wheat plasma membrane 52.03 47.99
TraesCS1D01G309800.1 Wheat plasma membrane 33.72 29.82
TraesCS3D01G325400.1 Wheat golgi, plasma membrane, vacuole 33.14 29.46
TraesCS1D01G256100.1 Wheat golgi, peroxisome, plasma membrane 33.43 28.33
TraesCS6D01G308700.1 Wheat plasma membrane 31.1 27.94
TraesCS7D01G476400.1 Wheat plasma membrane 28.78 27.12
TraesCS6D01G309000.1 Wheat extracellular, golgi, plasma membrane 29.36 27.08
TraesCS7D01G403100.2 Wheat plasma membrane 31.1 26.82
TraesCS7D01G170200.1 Wheat golgi 30.52 26.72
TraesCS6D01G308500.1 Wheat plasma membrane 29.65 26.36
TraesCS6D01G308600.1 Wheat plasma membrane 29.94 26.21
TraesCS6D01G308800.1 Wheat golgi 30.23 26.0
TraesCS4D01G313000.1 Wheat mitochondrion, plasma membrane 28.78 25.85
TraesCS6D01G251700.1 Wheat plasma membrane 29.65 25.82
TraesCS6D01G308900.1 Wheat extracellular, golgi, plasma membrane 23.84 25.47
Protein Annotations
EnsemblPlants:TraesCS7D01G280200.1EnsemblPlantsGene:TraesCS7D01G280200GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:WAT1-relatedPANTHER:PTHR31218
PANTHER:PTHR31218:SF53SEG:segTMHMM:TMhelixMapMan:24.2.1.5::
Description
No Description!
Coordinates
chr7D:+:272583372..272593182
Molecular Weight (calculated)
36936.4 Da
IEP (calculated)
8.258
GRAVY (calculated)
0.578
Length
344 amino acids
Sequence
(BLAST)
001: MVDAVDARRV CGMPEKAQLH VVMLALQFGY AGFHVVYLPL NMGIGKLVFP VYRNIITLIL LVPFAYFLEK KDRPKLTLNF GFYLLGLDNT SPTFAPAIQN
101: SVLAITFTMA AALRIEKVVG TLACVAGASV ITLYKGPTIF GPVPFLAAVA GEGKNWTLGC VYLIGHCLSW SGWLVLQAPV LKKYPARLSV TSYTCFFGVI
201: QFLVIAAFFE RDVDAWVFHS GSEIFTILYA LAADMANENG NAGFIASGVA FAVQICCIDR GGPVFVAVYQ PVQTLVVAIM ASITLGEKFY LGSEERSRNG
301: KEAAAMAVAS AAFSGGEREV RSAKLGSSIT QPLLPPSSTT SDNV
Best Arabidopsis Sequence Match ( AT1G75500.1 )
(BLAST)
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.