Factsheet for TraesCS6D01G309000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G330100.1	Wheat	plasma membrane	96.51	92.78
TraesCS6B01G360900.1	Wheat	plasma membrane	95.98	92.27
TraesCS6D01G308900.1	Wheat	extracellular, golgi, plasma membrane	75.34	87.27
TraesCS6D01G308700.1	Wheat	plasma membrane	82.57	80.42
TraesCS6D01G308500.1	Wheat	plasma membrane	83.38	80.36
TraesCS6D01G308800.1	Wheat	golgi	82.57	77.0
TraesCS6D01G308600.1	Wheat	plasma membrane	80.43	76.34
Zm00001d018195_P001	Maize	plasma membrane	79.62	75.38
EES07591	Sorghum	golgi, plasma membrane	76.94	74.55
Os02t0768300-01	Rice	golgi, plasma membrane	73.73	71.61
TraesCS7D01G170200.1	Wheat	golgi	65.42	62.09
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	56.03	56.03
TraesCS7D01G476400.1	Wheat	plasma membrane	53.89	55.07
TraesCS3D01G325400.1	Wheat	golgi, plasma membrane, vacuole	47.99	46.25
TraesCS1D01G309800.1	Wheat	plasma membrane	47.19	45.24
TraesCS1D01G256100.1	Wheat	golgi, peroxisome, plasma membrane	46.92	43.1
TraesCS4D01G313000.1	Wheat	mitochondrion, plasma membrane	33.51	32.64
TraesCS3D01G003600.1	Wheat	golgi, plasma membrane, vacuole	32.71	31.44
TraesCS3D01G027300.1	Wheat	plasma membrane	30.56	30.56
TraesCS7D01G280200.1	Wheat	plasma membrane	27.08	29.36
TraesCS6D01G251700.1	Wheat	plasma membrane	26.27	24.81
TraesCS7D01G403100.2	Wheat	plasma membrane	24.93	23.31

Protein Annotations

EnsemblPlants:TraesCS6D01G309000.1	EnsemblPlantsGene:TraesCS6D01G309000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF21	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.5	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:419746993..419749470

Molecular Weight (calculated)

39405.0 Da

IEP (calculated)

9.732

GRAVY (calculated)

0.643

Length

373 amino acids

Sequence
(BLAST)

001: MVLLQVGFAG MYIIAVASLK AGMSHFVLVV YRNLVATAVM APFALYFERG QRPKMTITIF LKIMGLAFLE PVIDQNLYFM GAKLTSAGFA TALVNILPAV
101: TFVLALLLRM EKVRLRSLHS QAKIAGTVLT VAGAVLMVLY HGPIVQFPWT KGQHHATASG QGAGGAADAR DWLNGTIMVI IACVAWACFF ILQSNTLRSY
201: PAELSLTVLI CGMGSLMSGA IALVAERANT QAWVIGFDMR LFTAVYAGIV CSGVAYYVQG IVSRQRGPVF VTAFNPLCMI ITAVMGSIIL KEEINLGSVI
301: GAAIIVGGLY FLIWGKSKDE ISKAGGSSKG AGELPLTSVT SGQGSGSGKQ ELRNGNGGGH VFGVETPAAN GHY

Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)

001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI

Arabidopsis Description

WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.