Factsheet for TraesCS6D01G308600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G360500.1	Wheat	extracellular, golgi, plasma membrane	72.77	93.46
TraesCS6A01G329700.1	Wheat	plasma membrane	90.33	92.21
HORVU6Hr1G080220.1	Barley	golgi, plasma membrane	88.55	89.69
TraesCS6D01G308700.1	Wheat	plasma membrane	82.19	84.33
TraesCS6D01G308900.1	Wheat	extracellular, golgi, plasma membrane	65.9	80.43
TraesCS6D01G309000.1	Wheat	extracellular, golgi, plasma membrane	76.34	80.43
TraesCS6D01G308500.1	Wheat	plasma membrane	77.86	79.07
TraesCS6D01G308800.1	Wheat	golgi	79.13	77.75
Zm00001d018195_P001	Maize	plasma membrane	73.54	73.35
EES07591	Sorghum	golgi, plasma membrane	70.48	71.95
Os02t0768300-01	Rice	golgi, plasma membrane	68.7	70.31
TraesCS7D01G170200.1	Wheat	golgi	61.32	61.32
TraesCS7D01G476400.1	Wheat	plasma membrane	52.42	56.44
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	53.18	56.03
TraesCS3D01G325400.1	Wheat	golgi, plasma membrane, vacuole	46.06	46.77
TraesCS1D01G309800.1	Wheat	plasma membrane	45.29	45.76
TraesCS1D01G256100.1	Wheat	golgi, peroxisome, plasma membrane	44.78	43.35
TraesCS4D01G313000.1	Wheat	mitochondrion, plasma membrane	32.32	33.16
TraesCS3D01G003600.1	Wheat	golgi, plasma membrane, vacuole	31.55	31.96
TraesCS3D01G027300.1	Wheat	plasma membrane	30.28	31.9
TraesCS7D01G280200.1	Wheat	plasma membrane	26.21	29.94
TraesCS7D01G403100.2	Wheat	plasma membrane	25.7	25.31
TraesCS6D01G251700.1	Wheat	plasma membrane	24.94	24.81

Protein Annotations

EnsemblPlants:TraesCS6D01G308600.1	EnsemblPlantsGene:TraesCS6D01G308600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF21	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.5	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:419444632..419448772

Molecular Weight (calculated)

41937.0 Da

IEP (calculated)

9.766

GRAVY (calculated)

0.547

Length

393 amino acids

Sequence
(BLAST)

001: MGMGWGVVND VKPYLAMVLL QVGFAGMNIV AVSSLKGGMS HFVLVVYRNI VATAFMAPFA LYFERERRPK MTTTIFIKIM WLAFLEPVLD QNVYFMGAKL
101: TSAGFSTALL NTLPAVTFVL ALILRMEKVR LRSLHSQAKI AGTVLTVAGA VLMVLYHGPT LRFPWTKGHH HATIGGQGAA ARDWLVGTIM LIASCMIWPG
201: FFILQANTLR SYPAELSLTA LICGMGSLMS GAVALVAERA NTQVWAIGFD NRLFTVVYGG IVCSGVAYYL QGVVSRQRGP VFVTAFSPLS MVITAVMGSI
301: ILKEEITLGS VIGAVIIVSG LYFLIWGKSK DAISPSQVSD VSVKGAGELP LTSVTNGHGH GKQCGHAHGK QCGLGNGNGG HVDVETPTTN GHC

Best Arabidopsis Sequence Match ( AT2G39510.1 )
(BLAST)

001: MALKTWKPFI TVVSLQFGYA GLSIIAKFAL NQGMSPHVLA SYRHIVATIF IAPFAYFLDR KIRPKMTLSI FFKILLLGLL EPTIDQNLYY TGMKYTSATF
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV

Arabidopsis Description

WAT1-related protein At2g39510 [Source:UniProtKB/Swiss-Prot;Acc:O80638]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.