Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G256700.1 | Wheat | peroxisome | 98.52 | 99.26 |
| TraesCS1B01G267300.1 | Wheat | plasma membrane | 97.29 | 97.77 |
| EES19520 | Sorghum | peroxisome | 80.79 | 82.21 |
| Zm00001d010287_P002 | Maize | golgi, plasma membrane, vacuole | 81.03 | 80.44 |
| GSMUA_Achr9P17350_001 | Banana | golgi, plasma membrane | 65.02 | 73.95 |
| GSMUA_Achr3P09230_001 | Banana | plasma membrane | 70.44 | 73.9 |
| GSMUA_Achr6P08440_001 | Banana | plasma membrane | 67.0 | 72.53 |
| HORVU1Hr1G063340.4 | Barley | peroxisome | 63.79 | 71.35 |
| GSMUA_Achr10P... | Banana | plasma membrane | 66.01 | 70.34 |
| Os05t0409500-00 | Rice | mitochondrion | 83.5 | 69.61 |
| TraesCS3D01G325400.1 | Wheat | golgi, plasma membrane, vacuole | 64.53 | 67.7 |
| VIT_13s0084g00090.t01 | Wine grape | golgi, plasma membrane, plastid | 65.52 | 66.0 |
| Solyc10g078270.1.1 | Tomato | golgi, plasma membrane, plastid | 62.07 | 65.8 |
| PGSC0003DMT400018488 | Potato | golgi, plasma membrane, plastid | 61.58 | 65.44 |
| TraesCS1D01G309800.1 | Wheat | plasma membrane | 62.07 | 64.78 |
| Solyc10g080990.1.1 | Tomato | golgi, plasma membrane, plastid | 60.59 | 62.6 |
| KRH62737 | Soybean | plasma membrane | 61.08 | 62.31 |
| PGSC0003DMT400072217 | Potato | plasma membrane | 58.87 | 62.08 |
| KRH20615 | Soybean | plasma membrane | 61.33 | 60.88 |
| KRH13279 | Soybean | plasma membrane | 61.33 | 60.88 |
| Solyc10g080980.1.1 | Tomato | golgi, plasma membrane, vacuole | 57.39 | 60.84 |
| KRH56218 | Soybean | plasma membrane | 58.87 | 60.35 |
| CDX99012 | Canola | plasma membrane | 33.0 | 59.82 |
| Bra009296.1-P | Field mustard | plasma membrane | 57.88 | 58.9 |
| CDX70003 | Canola | plasma membrane | 57.88 | 58.9 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 56.65 | 57.21 |
| GSMUA_Achr6P16060_001 | Banana | plasma membrane | 43.84 | 54.43 |
| CDX99013 | Canola | golgi, plasma membrane, vacuole | 19.7 | 51.28 |
| TraesCS6D01G309000.1 | Wheat | extracellular, golgi, plasma membrane | 43.1 | 46.92 |
| TraesCS6D01G308500.1 | Wheat | plasma membrane | 43.84 | 45.99 |
| TraesCS6D01G308700.1 | Wheat | plasma membrane | 43.1 | 45.69 |
| TraesCS6D01G308600.1 | Wheat | plasma membrane | 43.35 | 44.78 |
| TraesCS7D01G476400.1 | Wheat | plasma membrane | 39.66 | 44.11 |
| TraesCS6D01G308800.1 | Wheat | golgi | 42.86 | 43.5 |
| TraesCS6D01G308900.1 | Wheat | extracellular, golgi, plasma membrane | 34.48 | 43.48 |
| TraesCS7D01G170200.1 | Wheat | golgi | 40.89 | 42.24 |
| TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 34.73 | 36.34 |
| TraesCS4D01G313000.1 | Wheat | mitochondrion, plasma membrane | 33.74 | 35.77 |
| TraesCS3D01G027300.1 | Wheat | plasma membrane | 31.53 | 34.32 |
| TraesCS7D01G280200.1 | Wheat | plasma membrane | 28.33 | 33.43 |
| TraesCS6D01G251700.1 | Wheat | plasma membrane | 27.59 | 28.35 |
| TraesCS7D01G403100.2 | Wheat | plasma membrane | 25.62 | 26.07 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G256100.1 | EnsemblPlantsGene:TraesCS1D01G256100 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF9 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:348671111..348672613
Molecular Weight (calculated)
44026.7 Da
IEP (calculated)
8.291
GRAVY (calculated)
0.453
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMQQGGGGG EGETLMQRCK PYVAMISLQF GYAGMNVITK VSLNHGMSHY VLVVYRHAFA TLSIAPFALF LERGKARPPR MTPLVFLNIF LLALMGPVID
101: QNFYYAGLKY TSPTFSCAMS NMLPAMTFVM AVIFRMEKVD LKKPRCMAKV AGTLVTVAGA MLMTLYKGRA VEMIWSRHAH LPGPHQDAAA AAKDWFKGSI
201: FLIIATLAWA SLFILQGPTL TRYNAPLTLT TLICFVGTLQ AIVVTLAMEH TTDVWKIGFD MNLLAAAYAG IVTSSLAYYV QGLVIQSRGP VFASAFSPLM
301: MIVVAIMGSF ILAENIYLGG IIGSVLIVAG LYSVLWGKHK EDVEKKEIEA TEIPVAIKGV EGNGRIMDMV ELDEVELEKA QANGKAVTIS VPAGAGEAGM
401: QRDDEN
101: QNFYYAGLKY TSPTFSCAMS NMLPAMTFVM AVIFRMEKVD LKKPRCMAKV AGTLVTVAGA MLMTLYKGRA VEMIWSRHAH LPGPHQDAAA AAKDWFKGSI
201: FLIIATLAWA SLFILQGPTL TRYNAPLTLT TLICFVGTLQ AIVVTLAMEH TTDVWKIGFD MNLLAAAYAG IVTSSLAYYV QGLVIQSRGP VFASAFSPLM
301: MIVVAIMGSF ILAENIYLGG IIGSVLIVAG LYSVLWGKHK EDVEKKEIEA TEIPVAIKGV EGNGRIMDMV ELDEVELEKA QANGKAVTIS VPAGAGEAGM
401: QRDDEN
001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI
Arabidopsis Description
WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.