Factsheet for TraesCS7D01G170200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 1
golgi 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G073900.1	Wheat	plasma membrane	98.98	99.49
TraesCS7A01G169100.1	Wheat	plasma membrane	97.96	99.23
Zm00001d044951_P001	Maize	plasma membrane	69.21	69.74
Zm00001d037160_P002	Maize	plasma membrane	66.67	68.41
EER88045	Sorghum	golgi, plasma membrane, plastid	68.45	68.1
Os06t0210000-00	Rice	golgi, plasma membrane	66.16	66.84
TraesCS6D01G308500.1	Wheat	plasma membrane	65.65	66.67
TraesCS6D01G309000.1	Wheat	extracellular, golgi, plasma membrane	62.09	65.42
TraesCS6D01G308700.1	Wheat	plasma membrane	62.6	64.23
TraesCS6D01G308800.1	Wheat	golgi	63.87	62.75
TraesCS6D01G308900.1	Wheat	extracellular, golgi, plasma membrane	51.15	62.42
HORVU7Hr1G035430.6	Barley	golgi	68.7	61.78
TraesCS6D01G308600.1	Wheat	plasma membrane	61.32	61.32
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	54.96	57.91
TraesCS7D01G476400.1	Wheat	plasma membrane	51.4	55.34
TraesCS3D01G325400.1	Wheat	golgi, plasma membrane, vacuole	42.49	43.15
TraesCS1D01G309800.1	Wheat	plasma membrane	41.98	42.42
TraesCS1D01G256100.1	Wheat	golgi, peroxisome, plasma membrane	42.24	40.89
TraesCS3D01G003600.1	Wheat	golgi, plasma membrane, vacuole	32.57	32.99
TraesCS4D01G313000.1	Wheat	mitochondrion, plasma membrane	31.81	32.64
TraesCS3D01G027300.1	Wheat	plasma membrane	30.53	32.17
TraesCS7D01G280200.1	Wheat	plasma membrane	26.72	30.52
TraesCS6D01G251700.1	Wheat	plasma membrane	23.41	23.29
TraesCS7D01G403100.2	Wheat	plasma membrane	23.41	23.06

Protein Annotations

EnsemblPlants:TraesCS7D01G170200.1	EnsemblPlantsGene:TraesCS7D01G170200	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF21	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.5	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:122843675..122846423

Molecular Weight (calculated)

41820.0 Da

IEP (calculated)

9.712

GRAVY (calculated)

0.603

Length

393 amino acids

Sequence
(BLAST)

001: MGVGKKVLND VKPYMMMILL QIGYAGMYIV SVASLKRGMS HYVLVTYRNL VATLVMLPFA LFFEKGTRPK MTLRIFIKIL GLALLEPVLD QNLYYVGNKL
101: TSASFSSALV NILPAVTFIM AIVLRMEKLR LRSSHSQAKV AGTICTVIGA VLMIMYHGPV VQFPWARGAH HVDQAASAAA AQSSATWLKG TIAIITSCVA
201: WAGFFVLQSN TLNSYPAALT LTTLICAMGT GINGSMALVA ERHDMSAWVI GLDTRLFTVV YSGVVCSGVA FFVQGIVTET RGPVFVTAFQ PLCMIITAVL
301: GSVILKEETT LGSVIGAAII VLGLYSLIWG KSNDIIDKPV HSVAEKLALP LTSVNGNGNG TNGTNGTNGG RHVNGGQVAH DVETPAVKGA ICH

Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)

001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI

Arabidopsis Description

WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.