Factsheet for Zm00001d037160_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044951_P001	Maize	plasma membrane	90.86	89.23
EER88045	Sorghum	golgi, plasma membrane, plastid	90.6	87.85
Os06t0210000-00	Rice	golgi, plasma membrane	75.72	74.55
Zm00001d018195_P001	Maize	plasma membrane	69.71	67.77
TraesCS7B01G073900.1	Wheat	plasma membrane	68.41	67.01
TraesCS7D01G170200.1	Wheat	golgi	68.41	66.67
TraesCS7A01G169100.1	Wheat	plasma membrane	67.36	66.49
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	57.96	59.52
Zm00001d009372_P002	Maize	plasma membrane	55.61	58.52
Zm00001d030424_P001	Maize	plasma membrane	45.17	53.4
HORVU7Hr1G035430.6	Barley	golgi	52.22	45.77
Zm00001d038554_P001	Maize	plasma membrane	44.13	42.89
Zm00001d010287_P002	Maize	golgi, plasma membrane, vacuole	45.43	42.54
Zm00001d043171_P001	Maize	plasma membrane	44.65	41.4
Zm00001d010655_P001	Maize	plasma membrane	44.65	39.77
Zm00001d054055_P001	Maize	golgi, plasma membrane, vacuole	35.25	34.18
Zm00001d029545_P001	Maize	plasma membrane	32.64	33.51
Zm00001d040089_P001	Maize	extracellular, golgi, plasma membrane	31.07	32.34
Zm00001d031913_P003	Maize	plasma membrane	33.94	32.02
Zm00001d049916_P001	Maize	golgi, plasma membrane, vacuole	32.64	31.89
Zm00001d036123_P002	Maize	plasma membrane	29.24	31.28
Zm00001d027682_P001	Maize	golgi, plasma membrane	32.38	29.67
Zm00001d017765_P002	Maize	plasma membrane	26.37	25.7
Zm00001d047208_P001	Maize	plasma membrane	25.33	25.0
Zm00001d036440_P003	Maize	plasma membrane	25.85	24.09
Zm00001d029383_P001	Maize	plastid	22.19	23.55

Protein Annotations

EntrezGene:100282610	MapMan:24.2.1.5	ProteinID:AQK83190.1	UniProt:B6T9F8	EMBL:EU961623	InterPro:EamA_dom
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF12
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI000182C117	InterPro:WAT1-related	EnsemblPlantsGene:Zm00001d037160	EnsemblPlants:Zm00001d037160_P002
EnsemblPlants:Zm00001d037160_T002	SEG:seg	:	:	:	:

Description

Nodulin protein

Coordinates

chr6:-:114309734..114312011

Molecular Weight (calculated)

40938.2 Da

IEP (calculated)

9.673

GRAVY (calculated)

0.702

Length

383 amino acids

Sequence
(BLAST)

001: MGVGKLMNDV KPYLAMVLLQ VGFSGMYIVS VASLKRGMNH FVLVVYRNLV ATVVMAPFAL LFERRVRPKM TPLIFLKIMG LAVLEPVLDQ NMYYLGAKLT
101: SATFASALVN ILPAITFLLA LALRMERLRL RSLRSQAKVV GTVCTVAGAV LMILYHGPVV PFPWSAGRLH HHVPAAAVES QSSASWLNGI CMIIGSCLCW
201: SGFFILQSNT LQSYPAELTL TTLICFLGSV LTGGVALVAE RRDMSAWVIG FDTRLFTAVY SGIVCSGVAF YVQGIVTQAR GPVFVTAFQP LCMIITTVLG
301: STILKEETTL GSVIGAAIIV VGLYCLIWGK SKDHLGSNGG KPGAAAVAEL PLTSSAPAWS NGKQALAVVE TTPPSSLPNK CVH

Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)

001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI

Arabidopsis Description

WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.