Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049916_P001 | Maize | golgi, plasma membrane, vacuole | 89.41 | 92.6 |
| EES15167 | Sorghum | plasma membrane | 90.15 | 91.27 |
| TraesCS3A01G007100.1 | Wheat | golgi, plasma membrane, vacuole | 78.33 | 83.03 |
| TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 78.82 | 82.47 |
| Os08t0561500-01 | Rice | plasma membrane | 78.33 | 82.17 |
| TraesCS3B01G006900.1 | Wheat | plasma membrane | 78.57 | 81.79 |
| TraesCS3B01G011600.1 | Wheat | plasma membrane | 78.08 | 81.07 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 64.78 | 79.46 |
| TraesCS7D01G280200.1 | Wheat | plasma membrane | 67.0 | 79.07 |
| GSMUA_Achr1P06750_001 | Banana | golgi, plasma membrane, vacuole | 61.58 | 77.88 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 73.15 | 76.74 |
| TraesCS7A01G281700.1 | Wheat | plasma membrane | 58.62 | 76.53 |
| KRH61091 | Soybean | plasma membrane | 69.46 | 72.68 |
| KRH17381 | Soybean | plasma membrane | 69.46 | 72.49 |
| KRH51770 | Soybean | plasma membrane | 69.21 | 72.24 |
| VIT_18s0001g13360.t01 | Wine grape | plasma membrane | 67.98 | 72.06 |
| AT1G75500.1 | Thale cress | plasma membrane | 68.23 | 71.21 |
| Bra008201.1-P | Field mustard | plasma membrane | 68.23 | 71.03 |
| Bra003751.1-P | Field mustard | plasma membrane | 67.24 | 70.73 |
| CDX68127 | Canola | plasma membrane | 67.24 | 70.73 |
| CDX85897 | Canola | plasma membrane | 67.49 | 70.62 |
| KRH05893 | Soybean | plasma membrane | 68.47 | 70.56 |
| Solyc04g080940.2.1 | Tomato | extracellular, plasma membrane | 66.75 | 70.39 |
| CDY64209 | Canola | golgi, plasma membrane, vacuole | 67.24 | 70.36 |
| CDY47518 | Canola | golgi, plasma membrane, vacuole | 67.0 | 70.1 |
| Bra015839.1-P | Field mustard | golgi, plasma membrane, vacuole | 67.0 | 70.1 |
| CDY39037 | Canola | golgi, plasma membrane, vacuole | 53.2 | 69.9 |
| Zm00001d054055_P001 | Maize | golgi, plasma membrane, vacuole | 67.49 | 69.37 |
| CDY20378 | Canola | plasma membrane | 65.76 | 69.17 |
| PGSC0003DMT400009630 | Potato | plasma membrane | 66.75 | 68.61 |
| Zm00001d040089_P001 | Maize | extracellular, golgi, plasma membrane | 55.17 | 60.87 |
| HORVU3Hr1G001040.3 | Barley | golgi, peroxisome | 62.81 | 60.57 |
| Zm00001d036123_P002 | Maize | plasma membrane | 45.07 | 51.12 |
| Zm00001d010287_P002 | Maize | golgi, plasma membrane, vacuole | 37.68 | 37.41 |
| Zm00001d038554_P001 | Maize | plasma membrane | 36.21 | 37.31 |
| Zm00001d044951_P001 | Maize | plasma membrane | 33.5 | 34.87 |
| Zm00001d043171_P001 | Maize | plasma membrane | 35.47 | 34.87 |
| Zm00001d017765_P002 | Maize | plasma membrane | 33.5 | 34.61 |
| Zm00001d010655_P001 | Maize | plasma membrane | 36.45 | 34.42 |
| Zm00001d037160_P002 | Maize | plasma membrane | 32.02 | 33.94 |
| Zm00001d018195_P001 | Maize | plasma membrane | 32.76 | 33.76 |
| Zm00001d009372_P002 | Maize | plasma membrane | 29.56 | 32.97 |
| Zm00001d029545_P001 | Maize | plasma membrane | 29.06 | 31.64 |
| Zm00001d036440_P003 | Maize | plasma membrane | 31.03 | 30.66 |
| Zm00001d030424_P001 | Maize | plasma membrane | 24.14 | 30.25 |
| Zm00001d027682_P001 | Maize | golgi, plasma membrane | 30.54 | 29.67 |
| Zm00001d047208_P001 | Maize | plasma membrane | 28.33 | 29.64 |
| Zm00001d029383_P001 | Maize | plastid | 24.38 | 27.42 |
Protein Annotations
| EntrezGene:100283745 | MapMan:24.2.1.5 | UniProt:A0A1D6KM72 | InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | ProteinID:ONM03941.1 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF53 | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI000844566B | InterPro:WAT1-related | EnsemblPlantsGene:Zm00001d031913 | EnsemblPlants:Zm00001d031913_P003 | EnsemblPlants:Zm00001d031913_T003 |
| SEG:seg | : | : | : | : | : |
Description
Nodulin-like protein 5NG4
Coordinates
chr1:-:206640493..206642534
Molecular Weight (calculated)
42884.7 Da
IEP (calculated)
9.007
GRAVY (calculated)
0.594
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSGEGRRV CGMPEKAQLH VAMLLLQFGY AGFHVVSRLA LNMGISKLVF PVYRNIIALC LLVPFAYFLE KKDRPQLTLN FVVQFFLLAL CGLVYNINIV
101: VTSHSITANQ GFYLLGLDNT SPTFASAIQN SVPAITFAMA AALRIEKVRL DRRDGVAKVA GTLACVAGAS VITLYKGPTI FGPSGSGGGG GLELAAVGGD
201: KNWTLGCVYL IGHCLSWSGW LVLQAPVLKK YPARLSVTSY TCFFGVIQFL VIAAFMERDA EAWKFHSGSE LFTILYAGFI ASGVAFAVQI WCIDRGGPVF
301: VAVYQPVQTL VVAIMASLTL GEKFYLGGII GAVLIVAGLY LVLWGKSEER ARVARDAVSG GDREGLLVAA AAGGGGGGIV RSAGNKAASA ATQPLLLPSS
401: TPTDNV
101: VTSHSITANQ GFYLLGLDNT SPTFASAIQN SVPAITFAMA AALRIEKVRL DRRDGVAKVA GTLACVAGAS VITLYKGPTI FGPSGSGGGG GLELAAVGGD
201: KNWTLGCVYL IGHCLSWSGW LVLQAPVLKK YPARLSVTSY TCFFGVIQFL VIAAFMERDA EAWKFHSGSE LFTILYAGFI ASGVAFAVQI WCIDRGGPVF
301: VAVYQPVQTL VVAIMASLTL GEKFYLGGII GAVLIVAGLY LVLWGKSEER ARVARDAVSG GDREGLLVAA AAGGGGGGIV RSAGNKAASA ATQPLLLPSS
401: TPTDNV
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.