Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049916_P001 | Maize | golgi, plasma membrane, vacuole | 93.02 | 95.15 |
| Zm00001d031913_P003 | Maize | plasma membrane | 91.27 | 90.15 |
| TraesCS3A01G007100.1 | Wheat | golgi, plasma membrane, vacuole | 80.3 | 84.07 |
| TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 81.05 | 83.76 |
| Os08t0561500-01 | Rice | plasma membrane | 80.3 | 83.2 |
| TraesCS3B01G006900.1 | Wheat | plasma membrane | 80.55 | 82.82 |
| TraesCS3B01G011600.1 | Wheat | plasma membrane | 80.3 | 82.35 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 66.33 | 80.36 |
| TraesCS7D01G280200.1 | Wheat | plasma membrane | 68.33 | 79.65 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 75.81 | 78.55 |
| GSMUA_Achr1P06750_001 | Banana | golgi, plasma membrane, vacuole | 62.84 | 78.5 |
| TraesCS7A01G281700.1 | Wheat | plasma membrane | 60.1 | 77.49 |
| KRH61091 | Soybean | plasma membrane | 71.32 | 73.71 |
| KRH17381 | Soybean | plasma membrane | 71.07 | 73.26 |
| VIT_18s0001g13360.t01 | Wine grape | plasma membrane | 69.83 | 73.11 |
| KRH51770 | Soybean | plasma membrane | 70.57 | 72.75 |
| Solyc04g080940.2.1 | Tomato | extracellular, plasma membrane | 69.83 | 72.73 |
| AT1G75500.1 | Thale cress | plasma membrane | 70.32 | 72.49 |
| Bra008201.1-P | Field mustard | plasma membrane | 70.07 | 72.05 |
| CDX85897 | Canola | plasma membrane | 69.58 | 71.91 |
| Bra003751.1-P | Field mustard | plasma membrane | 69.08 | 71.76 |
| EES06137 | Sorghum | plasma membrane | 69.08 | 71.76 |
| CDX68127 | Canola | plasma membrane | 69.08 | 71.76 |
| CDY64209 | Canola | golgi, plasma membrane, vacuole | 69.33 | 71.65 |
| CDY47518 | Canola | golgi, plasma membrane, vacuole | 69.08 | 71.39 |
| Bra015839.1-P | Field mustard | golgi, plasma membrane, vacuole | 69.08 | 71.39 |
| KRH05893 | Soybean | plasma membrane | 70.07 | 71.32 |
| PGSC0003DMT400009630 | Potato | plasma membrane | 69.83 | 70.89 |
| CDY39037 | Canola | golgi, plasma membrane, vacuole | 54.61 | 70.87 |
| CDY20378 | Canola | plasma membrane | 67.58 | 70.21 |
| HORVU3Hr1G001040.3 | Barley | golgi, peroxisome | 64.09 | 61.05 |
| EES02603 | Sorghum | plasma membrane | 55.86 | 59.73 |
| KXG19264 | Sorghum | plasma membrane | 45.64 | 50.83 |
| EES19520 | Sorghum | peroxisome | 37.41 | 37.59 |
| OQU78229 | Sorghum | plasma membrane | 36.66 | 37.22 |
| KXG30926 | Sorghum | plasma membrane | 29.43 | 36.53 |
| EES03768 | Sorghum | plasma membrane | 36.41 | 35.78 |
| KXG30925 | Sorghum | plasma membrane | 33.92 | 34.61 |
| EES07591 | Sorghum | golgi, plasma membrane | 32.67 | 34.03 |
| OQU91876 | Sorghum | golgi, plasma membrane | 30.92 | 33.7 |
| KXG40121 | Sorghum | golgi, plasma membrane, vacuole | 27.43 | 33.64 |
| EER88045 | Sorghum | golgi, plasma membrane, plastid | 31.67 | 32.15 |
| EER92847 | Sorghum | plasma membrane | 29.18 | 31.37 |
| EER94681 | Sorghum | plasma membrane | 29.68 | 30.91 |
| EER92187 | Sorghum | golgi, mitochondrion, plasma membrane, plastid | 29.43 | 30.73 |
| KXG20824 | Sorghum | cytosol, golgi, peroxisome | 31.67 | 30.02 |
| EER92186 | Sorghum | cytosol, golgi, peroxisome | 28.68 | 29.49 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:8057807 | UniProt:C5YN53 | EnsemblPlants:EES15167 | ProteinID:EES15167 | ProteinID:EES15167.1 |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009653 | GO:GO:0009705 | GO:GO:0009719 |
| GO:GO:0009826 | GO:GO:0009834 | GO:GO:0009987 | GO:GO:0010315 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0022857 | GO:GO:0040007 | GO:GO:0055085 | GO:GO:0090355 |
| GO:GO:0090358 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF53 | EnsemblPlantsGene:SORBI_3007G166900 | SUPFAM:SSF103481 |
| unigene:Sbi.10845 | TMHMM:TMhelix | UniParc:UPI0001A87D69 | InterPro:WAT1-related | RefSeq:XP_002445672.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr7:-:60187173..60190004
Molecular Weight (calculated)
42254.0 Da
IEP (calculated)
9.173
GRAVY (calculated)
0.602
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAGEGRRV CGMPEKAQLH VAMLALQFGY AGFHVVSRLA LNMGISKLVF PVYRNIIALC LLVPFAYFLE KKDRPQLTLN FVIQFFLLAL CGITANQGFY
101: LLGLDNTSPT FASAIQNSVP AITFAMAAAL RIEKVRLDRR DGVAKVAGTL ACVAGASVIT LYKGPTIFGP SGGGGGGDKL QLQQVAVAVA AGEKNWTLGC
201: VYLIGHCLSW SGWLVLQAPV LKKYPARLSV TSYTCFFGVI QFLVIAAFME RDADAWKFHS GSELFTILYA GFIASGVAFA VQIWCIDRGG PVFVAVYQPV
301: QTLVVAIMAS LTLGEKFYLG GIIGAVLIIA GLYLVLWGKS EERARIARDA AAALVVSGAG DREGLLAAGG GGGGGIRSKA AASAAVTQPL LLPSSTSTDN
401: V
101: LLGLDNTSPT FASAIQNSVP AITFAMAAAL RIEKVRLDRR DGVAKVAGTL ACVAGASVIT LYKGPTIFGP SGGGGGGDKL QLQQVAVAVA AGEKNWTLGC
201: VYLIGHCLSW SGWLVLQAPV LKKYPARLSV TSYTCFFGVI QFLVIAAFME RDADAWKFHS GSELFTILYA GFIASGVAFA VQIWCIDRGG PVFVAVYQPV
301: QTLVVAIMAS LTLGEKFYLG GIIGAVLIIA GLYLVLWGKS EERARIARDA AAALVVSGAG DREGLLAAGG GGGGGIRSKA AASAAVTQPL LLPSSTSTDN
401: V
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.