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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 4
  • cytosol 1
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d040089_P001 Maize extracellular, golgi, plasma membrane 91.2 92.93
Os01t0117900-02 Rice plasma membrane 88.8 89.04
TraesCS3A01G019600.1 Wheat plasma membrane 84.27 85.64
TraesCS3B01G026700.1 Wheat plasma membrane 83.73 85.09
TraesCS3D01G027300.1 Wheat plasma membrane 84.0 84.45
HORVU3Hr1G002710.4 Barley plasma membrane 83.73 77.72
GSMUA_Achr10P... Banana plasma membrane 70.4 72.93
GSMUA_Achr6P09500_001 Banana golgi, plasma membrane 69.87 72.58
VIT_17s0000g03050.t01 Wine grape plasma membrane 60.0 61.81
CDY51934 Canola plasma membrane 48.53 61.69
Bra001699.1-P Field mustard plasma membrane 57.6 61.54
CDX75960 Canola plasma membrane 48.27 61.36
CDX95542 Canola plasma membrane 49.6 60.98
KRH39121 Soybean plasma membrane 58.13 60.72
KRH48595 Soybean endoplasmic reticulum, plasma membrane 57.87 60.45
CDY18510 Canola plasma membrane 57.6 60.0
PGSC0003DMT400014719 Potato plasma membrane 57.33 59.89
Bra021301.1-P Field mustard plasma membrane 57.33 59.72
Solyc03g118900.1.1 Tomato plasma membrane 57.07 59.61
Bra018748.1-P Field mustard plasma membrane 57.07 59.44
CDX93689 Canola plasma membrane 57.07 59.44
CDY40602 Canola plasma membrane 46.67 58.53
EES06137 Sorghum plasma membrane 58.67 56.99
AT3G18200.2 Thale cress plasma membrane 57.07 55.87
EES15167 Sorghum plasma membrane 59.73 55.86
KXG19264 Sorghum plasma membrane 53.07 55.28
KXG40121 Sorghum golgi, plasma membrane, vacuole 29.87 34.25
EES03768 Sorghum plasma membrane 35.2 32.35
KXG30926 Sorghum plasma membrane 27.73 32.2
EES07591 Sorghum golgi, plasma membrane 32.8 31.95
OQU78229 Sorghum plasma membrane 33.6 31.9
EES19520 Sorghum peroxisome 33.87 31.83
EER94681 Sorghum plasma membrane 32.27 31.43
EER88045 Sorghum golgi, plasma membrane, plastid 32.8 31.14
OQU91876 Sorghum golgi, plasma membrane 29.87 30.43
KXG30925 Sorghum plasma membrane 31.47 30.03
EER92847 Sorghum plasma membrane 29.6 29.76
EER92187 Sorghum golgi, mitochondrion, plasma membrane, plastid 29.6 28.91
EER92186 Sorghum cytosol, golgi, peroxisome 29.07 27.95
KXG20824 Sorghum cytosol, golgi, peroxisome 30.93 27.42
Protein Annotations
MapMan:24.2.1.5EntrezGene:8079061UniProt:C5XEA2EnsemblPlants:EES02603ProteinID:EES02603ProteinID:EES02603.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF62EnsemblPlantsGene:SORBI_3003G096100SUPFAM:SSF103481unigene:Sbi.13131
TMHMM:TMhelixUniParc:UPI0001A84CB9InterPro:WAT1-relatedRefSeq:XP_002457483.1SEG:seg:
Description
hypothetical protein
Coordinates
chr3:-:8499492..8501691
Molecular Weight (calculated)
40549.5 Da
IEP (calculated)
9.482
GRAVY (calculated)
0.719
Length
375 amino acids
Sequence
(BLAST)
001: MGRDQQAGAA AMAPEKLKLF IGVLALQFLL AGFHIVSRAA LNMGVSKIVF IVYRNVISLA LLAPFAYFLE KKDRPPLTFS LLVEFFLLAL CGITANQGFY
101: LLGLYHLSPT YASAIQNTVP AITFVMAAVL RLEQVDLSRR HGVAKVVGTV VSIGGATVIT LYKGLPLFHH NLHVKSLVTL SSSSPILNWT LGCVFILGHC
201: LSWSGWMVLQ VPVLKRYPAR LSVLSLTCIF GLLQFLVIAV FTEEDLSRWK VHSGVELFTI LYAGLVASGV AFALQIWCID RGGPLFTAVF QPVQTVAVAV
301: MAAAILGDQL YTGGIIGAVL IVIGLYFVLW GKSAEKKAAR NLQDQLARHQ GGDVTRHLLG GEASVKDEEA PAMLA
Best Arabidopsis Sequence Match ( AT3G18200.2 )
(BLAST)
001: MCYQTSKKKR RSRKRRAQEE KEKMGKGVVS EKVKLVVALI TLQFCFAGFH IVSRVALNIG VSKVVYPVYR NLLALLLIGP FAYFFEKKER PPLTISLLAQ
101: FFFLALIGIT ANQGFYLLGL YYATPTFASA MQNSVPAITF IMACALRLEH IDLVRKHGVA KVLGTLVSIG GATVITLYRG FPIFDQGLNM QKEEVVGSDN
201: SHSLTLGWLY LMGHCLSWAG WMVLQAPVLK QYPAKLTLTS FTCFFGLIQF LVIALFVETD LNNWIIVSWE ELFTILYAGI IASGLVVYLQ TWCIYKSGPV
301: FVAVFQPLQT LLVAAMAFLI LGDQLYSGGI VGAVFIMLGL YLVLWGKNEE RKLALEESQQ DPESLTKHLL EAQHKKSNSE SEV
Arabidopsis Description
WAT1-related protein At3g18200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV20]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.