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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51934 Canola plasma membrane 91.8 94.92
CDX75960 Canola plasma membrane 90.82 93.9
CDY40602 Canola plasma membrane 82.95 84.62
CDY18510 Canola plasma membrane 97.7 82.78
CDX93689 Canola plasma membrane 87.54 74.17
AT3G18200.2 Thale cress plasma membrane 93.11 74.15
VIT_17s0000g03050.t01 Wine grape plasma membrane 72.13 60.44
KRH48595 Soybean endoplasmic reticulum, plasma membrane 70.82 60.17
KRH39121 Soybean plasma membrane 69.84 59.33
PGSC0003DMT400014719 Potato plasma membrane 68.85 58.5
Solyc03g118900.1.1 Tomato plasma membrane 68.2 57.94
CDY39037 Canola golgi, plasma membrane, vacuole 53.44 52.75
Os02t0331400-00 Rice plasma membrane 57.38 52.71
GSMUA_Achr10P... Banana plasma membrane 61.64 51.93
GSMUA_Achr6P09500_001 Banana golgi, plasma membrane 60.66 51.25
TraesCS3A01G019600.1 Wheat plasma membrane 60.66 50.14
Os01t0117900-02 Rice plasma membrane 61.31 50.0
TraesCS3B01G026700.1 Wheat plasma membrane 60.33 49.86
EES02603 Sorghum plasma membrane 60.98 49.6
Zm00001d040089_P001 Maize extracellular, golgi, plasma membrane 59.67 49.46
TraesCS3D01G027300.1 Wheat plasma membrane 60.33 49.33
HORVU3Hr1G002710.4 Barley plasma membrane 60.66 45.79
CDX85897 Canola plasma membrane 57.7 45.36
CDY64209 Canola golgi, plasma membrane, vacuole 57.7 45.36
CDY47518 Canola golgi, plasma membrane, vacuole 57.7 45.36
CDX68127 Canola plasma membrane 57.05 45.08
CDY20378 Canola plasma membrane 56.72 44.82
Zm00001d036123_P002 Maize plasma membrane 51.15 43.58
KXG19264 Sorghum plasma membrane 49.84 42.22
CDY45218 Canola plasma membrane 44.26 36.1
CDY09817 Canola plasma membrane 37.05 32.75
CDY65991 Canola plasma membrane 38.03 30.69
CDX79734 Canola golgi, plasma membrane, vacuole 36.39 30.66
CDY07788 Canola golgi, plasma membrane, vacuole 35.41 29.83
CDX91104 Canola plasma membrane 37.05 29.82
CDX85633 Canola plasma membrane 37.05 29.82
CDX86054 Canola plasma membrane 37.05 29.43
CDY09279 Canola plasma membrane 38.36 29.4
CDX99139 Canola plasma membrane 36.72 29.17
CDX99012 Canola plasma membrane 21.31 29.02
CDY07016 Canola plasma membrane 35.41 28.72
CDY22493 Canola plasma membrane 19.34 28.64
CDY53594 Canola plasma membrane 35.08 28.53
CDX93255 Canola plasma membrane 35.08 28.46
CDX76488 Canola plasma membrane 37.05 28.39
CDY20446 Canola plasma membrane 34.75 28.27
CDX76001 Canola plasma membrane 34.43 28.23
CDX79735 Canola golgi, plasma membrane, vacuole 25.9 27.92
CDY06954 Canola plasma membrane 35.41 27.91
CDX94896 Canola plasma membrane 33.77 27.84
CDY65383 Canola golgi, plasma membrane, vacuole 22.95 27.67
CDY53669 Canola plasma membrane 35.74 27.66
CDX79964 Canola plasma membrane 35.74 27.66
CDX75163 Canola plasma membrane 34.75 27.6
CDX91365 Canola plasma membrane 34.1 27.37
CDX74958 Canola plasma membrane 34.1 27.37
CDX93378 Canola cytosol, plasma membrane, vacuole 33.44 27.35
CDX70003 Canola plasma membrane 35.74 27.32
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 33.44 27.27
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 33.44 27.27
CDY29141 Canola plasma membrane 34.1 27.15
CDY14752 Canola plasma membrane 34.43 27.13
CDY68060 Canola plasma membrane 34.43 27.13
CDY18444 Canola plasma membrane 33.11 27.08
CDX78925 Canola plasma membrane 34.75 27.04
CDY35431 Canola plasma membrane 34.75 26.97
CDX72122 Canola plasma membrane 33.11 26.93
CDY49560 Canola golgi, plasma membrane, vacuole 32.79 26.81
CDY68855 Canola plasma membrane 32.79 26.67
CDY00403 Canola plasma membrane 33.11 26.65
CDY63388 Canola golgi, plasma membrane, vacuole 32.46 26.54
CDY56779 Canola plasma membrane 32.79 26.53
CDY23125 Canola plasma membrane 32.79 26.04
CDY01310 Canola plasma membrane 33.11 26.03
CDY13057 Canola plasma membrane 32.46 25.78
CDY04680 Canola plasma membrane 33.44 25.76
CDY13056 Canola plasma membrane 32.13 25.59
CDY23124 Canola plasma membrane 31.8 25.33
CDY14996 Canola plasma membrane 31.15 24.87
CDY12554 Canola plasma membrane 30.82 24.61
CDY63536 Canola plasma membrane 25.9 23.72
CDX99013 Canola golgi, plasma membrane, vacuole 12.13 23.72
CDX99393 Canola mitochondrion 35.41 21.69
Protein Annotations
EnsemblPlants:CDX95542EnsemblPlantsGene:GSBRNA2T00101371001GO:A0A078E358GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF62PFAM:PF00892ProteinID:CDX95542ProteinID:CDX95542.1
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EF2C0BMapMan:24.2.1.5::
Description
BnaC01g34340D
Coordinates
chrLK031889:-:1096774..1098351
Molecular Weight (calculated)
33964.5 Da
IEP (calculated)
9.026
GRAVY (calculated)
0.697
Length
305 amino acids
Sequence
(BLAST)
001: MGKEVVSEKM KLVVALITLQ FCFAGFHIVS RVALNIGVSK VVYPVYRNLL ALLLIGPFAY FLEKKERPPL TISLLVQFFL LALIGITANQ GFYLLGLYYA
101: TPTFASAMQN SVPAITFIMA CALRLEHIDL VRKHGVAKVL GTLVSIAPVL KKYPAKLTLT SFTCFFGLVQ FLVIALFVET DLNNWIIVSW EELFTILYAG
201: LIASGLVVYL QTWCIYKGGP VFVAVFQPLQ TLLVAAMAFL VLGDQLYSGR IVGAVFIMLG LYLVLWGKNE ERRQVLEQTT QQDPESLTKH LLEAQDKKTN
301: AESQV
Best Arabidopsis Sequence Match ( AT3G18200.1 )
(BLAST)
001: MQNSVPAITF IMACALRLEH IDLVRKHGVA KVLGTLVSIG GATVITLYRG FPIFDQGLNM QKEEVVGSDN SHSLTLGWLY LMGHCLSWAG WMVLQAPVLK
101: QYPAKLTLTS FTCFFGLIQF LVIALFVETD LNNWIIVSWE ELFTILYAGI IASGLVVYLQ TWCIYKSGPV FVAVFQPLQT LLVAAMAFLI LGDQLYSGGI
201: VGAVFIMLGL YLVLWGKNEE RKLALEESQQ DPESLTKHLL EAQHKKSNSE SEV
Arabidopsis Description
WAT1-related protein At3g18200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV20]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.