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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07788 Canola golgi, plasma membrane, vacuole 98.07 98.07
CDX79735 Canola golgi, plasma membrane, vacuole 71.55 91.52
CDX93378 Canola cytosol, plasma membrane, vacuole 87.02 84.45
AT2G37460.1 Thale cress cytosol, plasma membrane, vacuole 88.12 83.95
CDY18444 Canola plasma membrane 85.64 83.11
CDX91365 Canola plasma membrane 87.02 82.89
CDX74958 Canola plasma membrane 87.02 82.89
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 75.97 73.53
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 75.41 72.99
PGSC0003DMT400022827 Potato golgi, plasma membrane, vacuole 61.33 59.2
Solyc09g010360.2.1 Tomato golgi, plasma membrane, vacuole 61.05 58.93
KRH67559 Soybean plasma membrane 61.33 58.89
KRG95827 Soybean plasma membrane 61.33 57.96
KRH19731 Soybean cytosol 59.67 56.99
KRH32320 Soybean plasma membrane 58.29 55.67
VIT_08s0040g02500.t01 Wine grape plasma membrane, vacuole 61.33 55.22
CDY07016 Canola plasma membrane 53.59 51.6
CDY53594 Canola plasma membrane 53.31 51.47
CDY20446 Canola plasma membrane 53.31 51.47
CDX93255 Canola plasma membrane 53.04 51.06
Solyc12g098280.1.1 Tomato extracellular, golgi 38.67 49.65
PGSC0003DMT400095497 Potato plasma membrane 28.73 48.15
CDY09817 Canola plasma membrane 45.03 47.25
CDY65991 Canola plasma membrane 46.41 44.44
CDY00403 Canola plasma membrane 46.13 44.06
CDX99012 Canola plasma membrane 27.07 43.75
CDY63388 Canola golgi, plasma membrane, vacuole 44.75 43.43
CDY49560 Canola golgi, plasma membrane, vacuole 44.75 43.43
CDX91104 Canola plasma membrane 45.3 43.27
CDX85633 Canola plasma membrane 45.3 43.27
CDY22493 Canola plasma membrane 24.59 43.2
CDY29141 Canola plasma membrane 45.3 42.82
CDY01310 Canola plasma membrane 45.58 42.53
CDX75163 Canola plasma membrane 45.03 42.45
CDY04680 Canola plasma membrane 46.13 42.17
CDX70003 Canola plasma membrane 45.58 41.35
CDY14996 Canola plasma membrane 42.54 40.31
CDX94896 Canola plasma membrane 41.16 40.27
CDY12554 Canola plasma membrane 42.27 40.05
CDY06954 Canola plasma membrane 42.54 39.79
CDY68060 Canola plasma membrane 42.54 39.79
CDX76001 Canola plasma membrane 40.88 39.78
CDY68855 Canola plasma membrane 41.16 39.73
CDY53669 Canola plasma membrane 43.09 39.59
CDY14752 Canola plasma membrane 42.27 39.53
CDX79964 Canola plasma membrane 42.82 39.34
CDY35431 Canola plasma membrane 42.54 39.19
CDY56779 Canola plasma membrane 40.06 38.46
CDY51934 Canola plasma membrane 31.22 38.31
CDX72122 Canola plasma membrane 39.5 38.13
CDX75960 Canola plasma membrane 30.94 37.97
CDX99013 Canola golgi, plasma membrane, vacuole 16.3 37.82
CDX95542 Canola plasma membrane 30.66 36.39
CDY63536 Canola plasma membrane 32.87 35.74
CDX93689 Canola plasma membrane 35.08 35.28
CDY40602 Canola plasma membrane 29.01 35.12
CDY18510 Canola plasma membrane 34.81 35.0
CDY47518 Canola golgi, plasma membrane, vacuole 34.25 31.96
CDY64209 Canola golgi, plasma membrane, vacuole 34.25 31.96
CDX85897 Canola plasma membrane 34.25 31.96
CDY39037 Canola golgi, plasma membrane, vacuole 27.07 31.72
CDY20378 Canola plasma membrane 33.7 31.61
CDX68127 Canola plasma membrane 33.43 31.35
CDX99139 Canola plasma membrane 28.73 27.08
CDY45218 Canola plasma membrane 27.9 27.01
CDX86054 Canola plasma membrane 28.45 26.82
CDY23125 Canola plasma membrane 27.35 25.78
CDY13057 Canola plasma membrane 27.35 25.78
CDY13056 Canola plasma membrane 27.07 25.59
CDY23124 Canola plasma membrane 26.8 25.33
CDY09279 Canola plasma membrane 26.8 24.37
CDY65383 Canola golgi, plasma membrane, vacuole 16.57 23.72
CDX78925 Canola plasma membrane 25.41 23.47
CDX76488 Canola plasma membrane 25.69 23.37
CDX99393 Canola mitochondrion 26.8 19.48
Protein Annotations
EnsemblPlants:CDX79734EnsemblPlantsGene:GSBRNA2T00132554001GO:A0A078CUN7GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF29PFAM:PF00892ProteinID:CDX79734ProteinID:CDX79734.1
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EEB629MapMan:24.2.1.5::
Description
BnaC03g20700D
Coordinates
chrLK031818:-:2005823..2009075
Molecular Weight (calculated)
39251.4 Da
IEP (calculated)
9.446
GRAVY (calculated)
0.657
Length
362 amino acids
Sequence
(BLAST)
001: MEEVRKRGCM EKARPVILVV LLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATLVMAP FALYFDKKVR PKMTFMIFFR ITLLGLLEPV IDQNLYYLGM
101: KYTTATFATA MYNVLPAITF ILAYIFGLER VKLRCIRSAG KVIGTLATVG GAMIMTLVKG PVLDLFWTKG ASAPNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAFTLR TYPAELSLTA WICLMGTIEG AVVALVIEKG NPGAWAIGWD TKLITATYTG IVCSGIGYYV GGIVMKTKGP VFVTAFSPLG MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKSK DYKYPSTPQI DGESAQPSVQ LCRNGQDGVE TL
Best Arabidopsis Sequence Match ( AT2G37460.1 )
(BLAST)
001: MEEVKKRDCM EKARPFISMV VLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATIVMAP FAFYFDKKVR PKMTLMIFFK ISLLGLLEPV IDQNLYYLGM
101: KYTTATFATA MYNVLPAITF VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLFWTKG VSAHNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAITLR TYPAELSLTA WICLMGTIEG TAVALVMEKG NPSAWAIGWD TKLLTATYSG IVCSALAYYV GGVVMKTRGP VFVTAFSPLC MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKGK DYKYNSTLQL DDESAQPKLE LSGNGKDNVD HEVITISKQG EQRRTAVETV
Arabidopsis Description
WAT1-related protein At2g37460 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS1]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.