Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14996 | Canola | plasma membrane | 98.17 | 98.17 |
| AT1G44800.1 | Thale cress | plasma membrane | 85.34 | 88.11 |
| CDY49560 | Canola | golgi, plasma membrane, vacuole | 74.35 | 76.14 |
| CDY63388 | Canola | golgi, plasma membrane, vacuole | 74.08 | 75.87 |
| KRH64697 | Soybean | golgi, nucleus, plasma membrane | 58.38 | 56.6 |
| KRH53223 | Soybean | golgi, nucleus, plasma membrane | 58.38 | 55.89 |
| KRH16315 | Soybean | golgi, nucleus, plastid | 56.28 | 55.56 |
| KRH18766 | Soybean | golgi, nucleus, plasma membrane | 56.54 | 55.53 |
| VIT_18s0001g03160.t01 | Wine grape | golgi, plasma membrane | 56.54 | 55.24 |
| PGSC0003DMT400002407 | Potato | golgi, plasma membrane | 52.88 | 54.89 |
| CDY00403 | Canola | plasma membrane | 54.45 | 54.88 |
| Solyc11g012930.1.1 | Tomato | golgi, plasma membrane | 52.36 | 54.2 |
| CDY01310 | Canola | plasma membrane | 54.19 | 53.35 |
| CDY04680 | Canola | plasma membrane | 54.97 | 53.03 |
| CDY20446 | Canola | plasma membrane | 47.38 | 48.27 |
| CDY53594 | Canola | plasma membrane | 47.12 | 48.0 |
| CDY07016 | Canola | plasma membrane | 46.86 | 47.61 |
| CDX93255 | Canola | plasma membrane | 46.6 | 47.34 |
| CDX99012 | Canola | plasma membrane | 26.18 | 44.64 |
| CDY22493 | Canola | plasma membrane | 23.3 | 43.2 |
| CDY07788 | Canola | golgi, plasma membrane, vacuole | 40.31 | 42.54 |
| CDY29141 | Canola | plasma membrane | 42.41 | 42.3 |
| CDX79734 | Canola | golgi, plasma membrane, vacuole | 40.05 | 42.27 |
| CDX70003 | Canola | plasma membrane | 43.46 | 41.6 |
| CDX75163 | Canola | plasma membrane | 41.62 | 41.41 |
| CDX79735 | Canola | golgi, plasma membrane, vacuole | 30.63 | 41.34 |
| CDY09817 | Canola | plasma membrane | 36.91 | 40.87 |
| CDX93378 | Canola | cytosol, plasma membrane, vacuole | 39.53 | 40.48 |
| CDY18444 | Canola | plasma membrane | 39.01 | 39.95 |
| CDX91365 | Canola | plasma membrane | 39.01 | 39.21 |
| CDX74958 | Canola | plasma membrane | 39.01 | 39.21 |
| CDY18443 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 37.96 | 38.77 |
| CDX93377 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 37.7 | 38.5 |
| CDY65991 | Canola | plasma membrane | 37.7 | 38.1 |
| CDX91104 | Canola | plasma membrane | 37.17 | 37.47 |
| CDY63536 | Canola | plasma membrane | 32.46 | 37.24 |
| CDX85633 | Canola | plasma membrane | 36.91 | 37.2 |
| CDX99013 | Canola | golgi, plasma membrane, vacuole | 15.18 | 37.18 |
| CDY68855 | Canola | plasma membrane | 36.39 | 37.07 |
| CDX76001 | Canola | plasma membrane | 35.34 | 36.29 |
| CDX94896 | Canola | plasma membrane | 34.55 | 35.68 |
| CDY06954 | Canola | plasma membrane | 36.13 | 35.66 |
| CDY35431 | Canola | plasma membrane | 36.65 | 35.62 |
| CDY56779 | Canola | plasma membrane | 35.08 | 35.54 |
| CDY68060 | Canola | plasma membrane | 35.86 | 35.4 |
| CDY14752 | Canola | plasma membrane | 35.34 | 34.88 |
| CDX79964 | Canola | plasma membrane | 35.86 | 34.77 |
| CDX72122 | Canola | plasma membrane | 34.03 | 34.67 |
| CDY53669 | Canola | plasma membrane | 35.6 | 34.52 |
| CDX75960 | Canola | plasma membrane | 24.61 | 31.86 |
| CDY51934 | Canola | plasma membrane | 24.61 | 31.86 |
| CDY45218 | Canola | plasma membrane | 31.15 | 31.82 |
| CDX93689 | Canola | plasma membrane | 29.58 | 31.39 |
| CDY18510 | Canola | plasma membrane | 29.06 | 30.83 |
| CDY65383 | Canola | golgi, plasma membrane, vacuole | 20.42 | 30.83 |
| CDX95542 | Canola | plasma membrane | 24.61 | 30.82 |
| CDY40602 | Canola | plasma membrane | 23.56 | 30.1 |
| CDX68127 | Canola | plasma membrane | 29.58 | 29.27 |
| CDY20378 | Canola | plasma membrane | 29.58 | 29.27 |
| CDX85897 | Canola | plasma membrane | 29.58 | 29.12 |
| CDY47518 | Canola | golgi, plasma membrane, vacuole | 29.06 | 28.61 |
| CDY64209 | Canola | golgi, plasma membrane, vacuole | 29.06 | 28.61 |
| CDY39037 | Canola | golgi, plasma membrane, vacuole | 22.25 | 27.51 |
| CDX86054 | Canola | plasma membrane | 26.44 | 26.3 |
| CDX99139 | Canola | plasma membrane | 26.18 | 26.04 |
| CDY09279 | Canola | plasma membrane | 26.7 | 25.63 |
| CDY23125 | Canola | plasma membrane | 25.65 | 25.52 |
| CDY13057 | Canola | plasma membrane | 25.65 | 25.52 |
| CDY23124 | Canola | plasma membrane | 25.39 | 25.33 |
| CDX76488 | Canola | plasma membrane | 26.18 | 25.13 |
| CDY13056 | Canola | plasma membrane | 25.13 | 25.07 |
| CDX78925 | Canola | plasma membrane | 23.56 | 22.96 |
| CDX99393 | Canola | mitochondrion | 25.13 | 19.28 |
Protein Annotations
| MapMan:24.2.1.5 | GO:A0A078FHV4 | UniProt:A0A078FHV4 | EnsemblPlants:CDY12554 | ProteinID:CDY12554 | ProteinID:CDY12554.1 |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00061946001 | PFAM:PF00892 |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF12 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EE71CC | InterPro:WAT1-related |
Description
BnaC06g00800DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHV4]
Coordinates
chrLK032024:-:451712..454572
Molecular Weight (calculated)
41014.1 Da
IEP (calculated)
9.815
GRAVY (calculated)
0.655
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGGSNCGS LEKIKPILAI ISLQFGYAGM YIITMVSFKH GMDHWVLATY RHIVATLVMA PFALVFERKI RPKMTLPIFY RLLALGILEP LMDQNFYYIG
101: LKSTSASYTS AFTNALPAVT FILALIFRLE TVNFRKIHSI AKVVGTVITL AGAMVMTLYK GPAIEIVKAA HSSFHGGSNT ATGQHWVTGT LAIMGSISTW
201: AAFFILQSFT LKIYPAELSL VALICGIGSI LNFGVSMIFV RDLSAWKIGM DSGTLAAVYS GVVCSGIAYY IQSIVIKQRG PVFTTSFSPM CMVITAFLGA
301: LVLAEKIHLG SIIGAIFIVI GLYSVVWGKS KDVVNPLDEK IIVGQDLPIT NSVKQTNGDV LGSPMNGRDG SGAQVNGVAT SI
101: LKSTSASYTS AFTNALPAVT FILALIFRLE TVNFRKIHSI AKVVGTVITL AGAMVMTLYK GPAIEIVKAA HSSFHGGSNT ATGQHWVTGT LAIMGSISTW
201: AAFFILQSFT LKIYPAELSL VALICGIGSI LNFGVSMIFV RDLSAWKIGM DSGTLAAVYS GVVCSGIAYY IQSIVIKQRG PVFTTSFSPM CMVITAFLGA
301: LVLAEKIHLG SIIGAIFIVI GLYSVVWGKS KDVVNPLDEK IIVGQDLPIT NSVKQTNGDV LGSPMNGRDG SGAQVNGVAT SI
001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
Arabidopsis Description
WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.