Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014029.1-P | Field mustard | plasma membrane | 89.46 | 87.57 |
| Bra040619.1-P | Field mustard | plasma membrane | 88.11 | 85.34 |
| CDY12554 | Canola | plasma membrane | 88.11 | 85.34 |
| CDY14996 | Canola | plasma membrane | 88.11 | 85.34 |
| AT4G08300.1 | Thale cress | plasma membrane | 75.41 | 74.8 |
| KRH16315 | Soybean | golgi, nucleus, plastid | 59.46 | 56.85 |
| KRH64697 | Soybean | golgi, nucleus, plasma membrane | 60.0 | 56.35 |
| KRH18766 | Soybean | golgi, nucleus, plasma membrane | 59.19 | 56.3 |
| KRH53223 | Soybean | golgi, nucleus, plasma membrane | 60.27 | 55.89 |
| VIT_18s0001g03160.t01 | Wine grape | golgi, plasma membrane | 58.38 | 55.24 |
| PGSC0003DMT400002407 | Potato | golgi, plasma membrane | 54.59 | 54.89 |
| Solyc11g012930.1.1 | Tomato | golgi, plasma membrane | 53.78 | 53.93 |
| AT1G21890.1 | Thale cress | plasma membrane | 55.95 | 53.21 |
| AT2G39510.1 | Thale cress | plasma membrane | 48.65 | 48.13 |
| AT2G37450.2 | Thale cress | extracellular, golgi, vacuole | 40.27 | 44.35 |
| AT4G08290.1 | Thale cress | plasma membrane | 44.32 | 42.71 |
| AT2G37460.1 | Thale cress | cytosol, plasma membrane, vacuole | 43.51 | 42.37 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 45.14 | 41.54 |
| AT3G56620.1 | Thale cress | plasma membrane | 39.46 | 38.73 |
| AT5G13670.1 | Thale cress | plasma membrane | 38.65 | 37.93 |
| AT2G40900.1 | Thale cress | plasma membrane | 38.65 | 36.29 |
| AT3G53210.1 | Thale cress | plasma membrane | 31.08 | 31.17 |
| AT3G18200.2 | Thale cress | plasma membrane | 30.54 | 29.5 |
| AT4G24980.1 | Thale cress | plasma membrane | 21.35 | 29.26 |
| AT1G75500.1 | Thale cress | plasma membrane | 30.0 | 28.53 |
| AT3G45870.1 | Thale cress | plasma membrane | 28.38 | 27.27 |
| AT5G45370.2 | Thale cress | plasma membrane | 27.03 | 26.25 |
| AT4G19185.1 | Thale cress | plasma membrane | 28.11 | 26.13 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:841044 | ProteinID:AAF78263.1 | ProteinID:AEE32053.1 | ArrayExpress:AT1G44800 | EnsemblPlantsGene:AT1G44800 |
| RefSeq:AT1G44800 | TAIR:AT1G44800 | RefSeq:AT1G44800-TAIR-G | EnsemblPlants:AT1G44800.1 | TAIR:AT1G44800.1 | EMBL:AY049306 |
| EMBL:AY085398 | EMBL:AY149964 | Unigene:At.14882 | InterPro:EamA_dom | GO:GO:0003333 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006865 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0032973 | GO:GO:0034639 | GO:GO:0043090 | GO:GO:0055085 | GO:GO:0080144 |
| GO:GO:1902475 | RefSeq:NP_175101.1 | PFAM:PF00892 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001185 | PO:PO:0006203 |
| PO:PO:0006332 | PO:PO:0006333 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF12 | UniProt:Q9LPF1 | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI00000AC288 | InterPro:WAT1-related | : | : | : | : |
Description
WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
Coordinates
chr1:-:16913994..16917053
Molecular Weight (calculated)
39949.8 Da
IEP (calculated)
9.890
GRAVY (calculated)
0.622
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.