Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra014682.1-P | Field mustard | plasma membrane | 84.35 | 85.48 |
CDX94896 | Canola | plasma membrane | 83.82 | 85.41 |
CDY68855 | Canola | plasma membrane | 84.62 | 85.07 |
Bra003245.1-P | Field mustard | plasma membrane | 84.62 | 85.07 |
CDX76001 | Canola | plasma membrane | 83.82 | 84.95 |
CDY56779 | Canola | plasma membrane | 83.02 | 83.02 |
CDX72122 | Canola | plasma membrane | 82.49 | 82.93 |
Bra007258.1-P | Field mustard | plasma membrane | 82.49 | 82.49 |
CDY63536 | Canola | plasma membrane | 64.72 | 73.27 |
AT2G40900.1 | Thale cress | plasma membrane | 72.15 | 69.04 |
AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 45.89 | 43.03 |
AT1G21890.1 | Thale cress | plasma membrane | 44.3 | 42.93 |
AT2G39510.1 | Thale cress | plasma membrane | 40.05 | 40.37 |
AT2G37460.1 | Thale cress | cytosol, plasma membrane, vacuole | 40.32 | 40.0 |
AT1G44800.1 | Thale cress | plasma membrane | 38.73 | 39.46 |
AT2G37450.2 | Thale cress | extracellular, golgi, vacuole | 33.42 | 37.5 |
AT4G08300.1 | Thale cress | plasma membrane | 36.87 | 37.27 |
AT4G08290.1 | Thale cress | plasma membrane | 37.14 | 36.46 |
AT5G13670.1 | Thale cress | plasma membrane | 35.81 | 35.81 |
AT4G24980.1 | Thale cress | plasma membrane | 22.55 | 31.48 |
AT3G18200.2 | Thale cress | plasma membrane | 30.24 | 29.77 |
AT3G53210.1 | Thale cress | plasma membrane | 27.85 | 28.46 |
AT1G75500.1 | Thale cress | plasma membrane | 29.18 | 28.28 |
AT5G45370.2 | Thale cress | plasma membrane | 25.46 | 25.2 |
AT3G45870.1 | Thale cress | plasma membrane | 23.87 | 23.38 |
AT4G19185.1 | Thale cress | plasma membrane | 24.14 | 22.86 |
Protein Annotations
MapMan:24.2.1.5 | EntrezGene:824829 | ProteinID:AEE79545.1 | EMBL:AK220913 | ArrayExpress:AT3G56620 | EnsemblPlantsGene:AT3G56620 |
RefSeq:AT3G56620 | TAIR:AT3G56620 | RefSeq:AT3G56620-TAIR-G | EnsemblPlants:AT3G56620.1 | TAIR:AT3G56620.1 | EMBL:AY087210 |
Unigene:At.34917 | ProteinID:CAB88065.1 | InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0022857 | GO:GO:0055085 | RefSeq:NP_191221.1 | PFAM:PF00892 | PO:PO:0000013 | PO:PO:0000037 |
PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31218 |
PANTHER:PTHR31218:SF9 | UniProt:Q9LXX8 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000009EF8C | InterPro:WAT1-related |
SEG:seg | : | : | : | : | : |
Description
WAT1-related protein At3g56620 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXX8]
Coordinates
chr3:-:20972488..20974625
Molecular Weight (calculated)
41349.9 Da
IEP (calculated)
8.631
GRAVY (calculated)
0.691
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKMSESAK PYFAMVCLQF GYAGMNLVTK VVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRPKMT FPIFMQIFVL ALLGPLIDQN LYYAGLKLTS
101: PTFAGAVTNI VPALTFIISI ICRMEKVEMR KVRFQAKVVG TLVIVVGAML MILFKIPLIT FLRSHLTGHA LSPAGEDYLK ATVFLLIASF SWASFFVLQA
201: ATLKRYSSHL SLSTMVCFMG TLQSTALTFV MEPNLSAWNI GFDMNLLASA YAGIMSSSIA YYVQGMMTKQ KSVIFVTAFN PLVVIIGSII GFLILNQTLN
301: LGGVLGMAIL VVGVCTVLWG KEGDIDEEEN IEEKFVEIVK CCNRCDIKVL SMMPRIDEEV DVEMQSAGTA KVAVGFS
101: PTFAGAVTNI VPALTFIISI ICRMEKVEMR KVRFQAKVVG TLVIVVGAML MILFKIPLIT FLRSHLTGHA LSPAGEDYLK ATVFLLIASF SWASFFVLQA
201: ATLKRYSSHL SLSTMVCFMG TLQSTALTFV MEPNLSAWNI GFDMNLLASA YAGIMSSSIA YYVQGMMTKQ KSVIFVTAFN PLVVIIGSII GFLILNQTLN
301: LGGVLGMAIL VVGVCTVLWG KEGDIDEEEN IEEKFVEIVK CCNRCDIKVL SMMPRIDEEV DVEMQSAGTA KVAVGFS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.