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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014682.1-P Field mustard plasma membrane 84.35 85.48
CDX94896 Canola plasma membrane 83.82 85.41
CDY68855 Canola plasma membrane 84.62 85.07
Bra003245.1-P Field mustard plasma membrane 84.62 85.07
CDX76001 Canola plasma membrane 83.82 84.95
CDY56779 Canola plasma membrane 83.02 83.02
CDX72122 Canola plasma membrane 82.49 82.93
Bra007258.1-P Field mustard plasma membrane 82.49 82.49
CDY63536 Canola plasma membrane 64.72 73.27
AT2G40900.1 Thale cress plasma membrane 72.15 69.04
AT5G07050.1 Thale cress golgi, plasma membrane, vacuole 45.89 43.03
AT1G21890.1 Thale cress plasma membrane 44.3 42.93
AT2G39510.1 Thale cress plasma membrane 40.05 40.37
AT2G37460.1 Thale cress cytosol, plasma membrane, vacuole 40.32 40.0
AT1G44800.1 Thale cress plasma membrane 38.73 39.46
AT2G37450.2 Thale cress extracellular, golgi, vacuole 33.42 37.5
AT4G08300.1 Thale cress plasma membrane 36.87 37.27
AT4G08290.1 Thale cress plasma membrane 37.14 36.46
AT5G13670.1 Thale cress plasma membrane 35.81 35.81
AT4G24980.1 Thale cress plasma membrane 22.55 31.48
AT3G18200.2 Thale cress plasma membrane 30.24 29.77
AT3G53210.1 Thale cress plasma membrane 27.85 28.46
AT1G75500.1 Thale cress plasma membrane 29.18 28.28
AT5G45370.2 Thale cress plasma membrane 25.46 25.2
AT3G45870.1 Thale cress plasma membrane 23.87 23.38
AT4G19185.1 Thale cress plasma membrane 24.14 22.86
Protein Annotations
MapMan:24.2.1.5EntrezGene:824829ProteinID:AEE79545.1EMBL:AK220913ArrayExpress:AT3G56620EnsemblPlantsGene:AT3G56620
RefSeq:AT3G56620TAIR:AT3G56620RefSeq:AT3G56620-TAIR-GEnsemblPlants:AT3G56620.1TAIR:AT3G56620.1EMBL:AY087210
Unigene:At.34917ProteinID:CAB88065.1InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085RefSeq:NP_191221.1PFAM:PF00892PO:PO:0000013PO:PO:0000037
PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR31218
PANTHER:PTHR31218:SF9UniProt:Q9LXX8SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI000009EF8CInterPro:WAT1-related
SEG:seg:::::
Description
WAT1-related protein At3g56620 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXX8]
Coordinates
chr3:-:20972488..20974625
Molecular Weight (calculated)
41349.9 Da
IEP (calculated)
8.631
GRAVY (calculated)
0.691
Length
377 amino acids
Sequence
(BLAST)
001: MGLKMSESAK PYFAMVCLQF GYAGMNLVTK VVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRPKMT FPIFMQIFVL ALLGPLIDQN LYYAGLKLTS
101: PTFAGAVTNI VPALTFIISI ICRMEKVEMR KVRFQAKVVG TLVIVVGAML MILFKIPLIT FLRSHLTGHA LSPAGEDYLK ATVFLLIASF SWASFFVLQA
201: ATLKRYSSHL SLSTMVCFMG TLQSTALTFV MEPNLSAWNI GFDMNLLASA YAGIMSSSIA YYVQGMMTKQ KSVIFVTAFN PLVVIIGSII GFLILNQTLN
301: LGGVLGMAIL VVGVCTVLWG KEGDIDEEEN IEEKFVEIVK CCNRCDIKVL SMMPRIDEEV DVEMQSAGTA KVAVGFS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.