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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • peroxisome 1
  • extracellular 2
  • golgi 2
  • plasma membrane 4
  • endoplasmic reticulum 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:peroxisome
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76001 Canola plasma membrane 96.22 95.7
AT3G56620.1 Thale cress plasma membrane 85.41 83.82
CDY56779 Canola plasma membrane 85.41 83.82
CDX72122 Canola plasma membrane 84.59 83.47
CDY68855 Canola plasma membrane 84.59 83.47
CDY63536 Canola plasma membrane 62.7 69.67
CDY22493 Canola plasma membrane 38.65 69.42
CDY53669 Canola plasma membrane 70.81 66.5
CDY68060 Canola plasma membrane 69.46 66.41
CDY14752 Canola plasma membrane 69.46 66.41
CDX79964 Canola plasma membrane 70.54 66.24
CDY06954 Canola plasma membrane 68.65 65.63
CDY35431 Canola plasma membrane 68.92 64.89
CDX70003 Canola plasma membrane 46.76 43.36
CDX99012 Canola plasma membrane 25.95 42.86
CDX79735 Canola golgi, plasma membrane, vacuole 31.89 41.7
CDY00403 Canola plasma membrane 42.7 41.69
CDX79734 Canola golgi, plasma membrane, vacuole 40.27 41.16
CDX93378 Canola cytosol, plasma membrane, vacuole 41.35 41.02
CDY20446 Canola plasma membrane 41.35 40.8
CDY07016 Canola plasma membrane 41.35 40.69
CDX93255 Canola plasma membrane 41.35 40.69
CDY07788 Canola golgi, plasma membrane, vacuole 39.73 40.61
CDY53594 Canola plasma membrane 41.08 40.53
CDY01310 Canola plasma membrane 42.43 40.46
CDY09817 Canola plasma membrane 37.57 40.29
CDY18444 Canola plasma membrane 40.54 40.21
CDX91365 Canola plasma membrane 40.54 39.47
CDX74958 Canola plasma membrane 40.54 39.47
CDY04680 Canola plasma membrane 42.16 39.39
CDY65991 Canola plasma membrane 38.92 38.1
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 37.03 36.63
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 37.03 36.63
CDY49560 Canola golgi, plasma membrane, vacuole 36.76 36.46
CDY63388 Canola golgi, plasma membrane, vacuole 36.49 36.19
CDX99013 Canola golgi, plasma membrane, vacuole 15.14 35.9
CDX91104 Canola plasma membrane 36.76 35.88
CDX85633 Canola plasma membrane 36.76 35.88
CDY51934 Canola plasma membrane 28.11 35.25
CDX75960 Canola plasma membrane 28.11 35.25
CDY29141 Canola plasma membrane 36.49 35.25
CDX75163 Canola plasma membrane 36.22 34.9
CDY14996 Canola plasma membrane 35.95 34.82
CDY12554 Canola plasma membrane 35.68 34.55
CDX95542 Canola plasma membrane 27.84 33.77
CDY40602 Canola plasma membrane 26.22 32.44
CDY18510 Canola plasma membrane 31.35 32.22
CDX93689 Canola plasma membrane 30.81 31.67
CDX68127 Canola plasma membrane 30.54 29.27
CDX85897 Canola plasma membrane 30.54 29.12
CDY47518 Canola golgi, plasma membrane, vacuole 30.27 28.87
CDY64209 Canola golgi, plasma membrane, vacuole 30.27 28.87
CDY20378 Canola plasma membrane 30.0 28.76
CDY39037 Canola golgi, plasma membrane, vacuole 23.78 28.48
CDY45218 Canola plasma membrane 28.38 28.07
CDX86054 Canola plasma membrane 27.57 26.56
CDX99139 Canola plasma membrane 27.3 26.3
CDY23125 Canola plasma membrane 25.95 25.0
CDY23124 Canola plasma membrane 25.68 24.8
CDY13057 Canola plasma membrane 25.68 24.74
CDY09279 Canola plasma membrane 26.49 24.62
CDY13056 Canola plasma membrane 24.86 24.02
CDX76488 Canola plasma membrane 25.14 23.37
CDY65383 Canola golgi, plasma membrane, vacuole 15.95 23.32
CDX78925 Canola plasma membrane 23.78 22.45
CDX99393 Canola mitochondrion 25.14 18.67
Protein Annotations
MapMan:24.2.1.5GO:A0A078E0C2EnsemblPlants:CDX94896ProteinID:CDX94896ProteinID:CDX94896.1InterPro:EamA_dom
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857EnsemblPlantsGene:GSBRNA2T00100354001PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF9
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EDFA47InterPro:WAT1-relatedSEG:seg:
Description
BnaC05g07750D
Coordinates
chrLK031886:+:12854..14769
Molecular Weight (calculated)
40831.0 Da
IEP (calculated)
8.742
GRAVY (calculated)
0.669
Length
370 amino acids
Sequence
(BLAST)
001: MSESAKPYFA MVCLQFGYAG MNLVTKVVLD GGMNHFVLVA YRNAFATAAI APFALLSKRK VRPKMTFPIF MQIFLLALLG PVIDQNLYYA GLRLTSPTFA
101: GAVTSIVPAL TFIISIIFRT EKVELRKVRF HAKVVGTLVI VVGAMLMILF KSPLINFLRS HLIREASSSA GEDYLRATVF LLIASFSWAS FFVLQAATLK
201: RYSSHLSLST MVCFLGTLQS TSLAFVMEPN LSAWNIAFDM NLLASAYAGI MSSSIAYYVQ GMMTKQKSVV FVTAFNPLIV IIVSIINFII LGQRLYLGGI
301: LGMVILMVGV CAVLWGKEGD EEENIEEKFV EVIKCCKDCG NNSLSMPIID EEVDVEMQST KKDKTVVDLL
Best Arabidopsis Sequence Match ( AT3G56620.1 )
(BLAST)
001: MGLKMSESAK PYFAMVCLQF GYAGMNLVTK VVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRPKMT FPIFMQIFVL ALLGPLIDQN LYYAGLKLTS
101: PTFAGAVTNI VPALTFIISI ICRMEKVEMR KVRFQAKVVG TLVIVVGAML MILFKIPLIT FLRSHLTGHA LSPAGEDYLK ATVFLLIASF SWASFFVLQA
201: ATLKRYSSHL SLSTMVCFMG TLQSTALTFV MEPNLSAWNI GFDMNLLASA YAGIMSSSIA YYVQGMMTKQ KSVIFVTAFN PLVVIIGSII GFLILNQTLN
301: LGGVLGMAIL VVGVCTVLWG KEGDIDEEEN IEEKFVEIVK CCNRCDIKVL SMMPRIDEEV DVEMQSAGTA KVAVGFS
Arabidopsis Description
WAT1-related protein At3g56620 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXX8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.