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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78905
CDX98596
CDX99411
CDY01565

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39510.1 CDX78905 AT4G19030.1 21798944
AT2G39510.1 CDX98596 AT4G19030.1 21798944
AT2G39510.1 CDX99411 AT4G19030.1 21798944
AT2G39510.1 CDY01565 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017068.1-P Field mustard plasma membrane 98.4 98.67
CDX93255 Canola plasma membrane 97.87 97.87
CDY53594 Canola plasma membrane 90.43 90.67
CDY20446 Canola plasma membrane 90.43 90.67
AT2G39510.1 Thale cress plasma membrane 88.56 89.04
Solyc06g031710.2.1 Tomato plasma membrane 53.46 55.22
PGSC0003DMT400076318 Potato plasma membrane 53.72 55.19
CDY07788 Canola golgi, plasma membrane, vacuole 51.86 53.87
CDX79734 Canola golgi, plasma membrane, vacuole 51.6 53.59
CDY18444 Canola plasma membrane 51.86 52.28
CDX93378 Canola cytosol, plasma membrane, vacuole 51.86 52.28
CDX91365 Canola plasma membrane 51.86 51.32
CDX74958 Canola plasma membrane 51.86 51.32
CDX79735 Canola golgi, plasma membrane, vacuole 38.56 51.24
PGSC0003DMT400071320 Potato plasma membrane 50.53 50.4
Solyc04g011340.2.1 Tomato plasma membrane 50.27 50.27
CDY18443 Canola endoplasmic reticulum, plasma membrane, vacuole 49.73 50.0
CDY09817 Canola plasma membrane 45.74 49.86
CDX93377 Canola endoplasmic reticulum, plasma membrane, vacuole 49.2 49.47
CDX91104 Canola plasma membrane 47.87 47.49
CDY00403 Canola plasma membrane 47.87 47.49
CDX85633 Canola plasma membrane 47.87 47.49
CDY14996 Canola plasma membrane 47.87 47.12
CDY12554 Canola plasma membrane 47.61 46.86
CDY65991 Canola plasma membrane 46.81 46.56
CDY49560 Canola golgi, plasma membrane, vacuole 46.01 46.38
CDY63388 Canola golgi, plasma membrane, vacuole 45.74 46.11
CDY01310 Canola plasma membrane 47.34 45.88
CDY04680 Canola plasma membrane 47.61 45.2
CDY29141 Canola plasma membrane 46.01 45.17
CDX75163 Canola plasma membrane 46.01 45.05
CDX99012 Canola plasma membrane 26.33 44.2
CDX70003 Canola plasma membrane 45.48 42.86
CDY22493 Canola plasma membrane 22.87 41.75
CDY68855 Canola plasma membrane 41.49 41.6
CDX76001 Canola plasma membrane 40.96 41.4
CDX94896 Canola plasma membrane 40.69 41.35
CDX99013 Canola golgi, plasma membrane, vacuole 16.49 39.74
CDY56779 Canola plasma membrane 39.63 39.52
CDX72122 Canola plasma membrane 39.36 39.47
CDY53669 Canola plasma membrane 40.96 39.09
CDY06954 Canola plasma membrane 39.89 38.76
CDX79964 Canola plasma membrane 40.43 38.58
CDY68060 Canola plasma membrane 39.63 38.5
CDY35431 Canola plasma membrane 39.89 38.17
CDY14752 Canola plasma membrane 39.1 37.98
CDY63536 Canola plasma membrane 33.51 37.84
CDY51934 Canola plasma membrane 28.19 35.93
CDX75960 Canola plasma membrane 27.93 35.59
CDX95542 Canola plasma membrane 28.72 35.41
CDX93689 Canola plasma membrane 32.45 33.89
CDY18510 Canola plasma membrane 32.18 33.61
CDX85897 Canola plasma membrane 34.31 33.25
CDX68127 Canola plasma membrane 34.04 33.16
CDY40602 Canola plasma membrane 26.33 33.11
CDY47518 Canola golgi, plasma membrane, vacuole 33.51 32.47
CDY64209 Canola golgi, plasma membrane, vacuole 33.51 32.47
CDY39037 Canola golgi, plasma membrane, vacuole 25.8 31.39
CDY20378 Canola plasma membrane 31.91 31.09
CDY45218 Canola plasma membrane 29.52 29.68
CDX99139 Canola plasma membrane 28.19 27.6
CDX86054 Canola plasma membrane 28.19 27.6
CDY23124 Canola plasma membrane 27.66 27.15
CDY13056 Canola plasma membrane 27.39 26.89
CDY65383 Canola golgi, plasma membrane, vacuole 18.09 26.88
CDY09279 Canola plasma membrane 27.93 26.38
CDY23125 Canola plasma membrane 26.86 26.3
CDX76488 Canola plasma membrane 27.39 25.88
CDY13057 Canola plasma membrane 26.33 25.78
CDX78925 Canola plasma membrane 26.06 25.0
CDX99393 Canola mitochondrion 26.86 20.28
Protein Annotations
EnsemblPlants:CDY07016EnsemblPlantsGene:GSBRNA2T00123330001GO:A0A078F0X5GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF18PFAM:PF00892ProteinID:CDY07016ProteinID:CDY07016.1
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EF44CEMapMan:24.2.1.5::
Description
BnaA04g22990D
Coordinates
chrLK031974:-:676073..678159
Molecular Weight (calculated)
40872.7 Da
IEP (calculated)
9.221
GRAVY (calculated)
0.561
Length
376 amino acids
Sequence
(BLAST)
001: MALKTWKPFL TVISLQFGYA GLSIIAKFAL DRGMSPHVLA AYRHIVATIF IAPFAFFLDS RKVRPKMTLP IFFKIALLGL LEPTIDQNLY YTGMKYTSAT
101: FTAAMTNVLP AFAFLMAWIF RLEKVNIRKI HSQAKILGTV VTVGGAMLMT VVKGPLVPLP WVNPNDSHQD SSNPGVTPDL TKGALLIAIG CICWAGFVNL
201: QAITLKSYPV ELSLTAYICL MGSIESTIVA LFIERGNPSA WAIQLDSKLL AAVYGGVICS GVGYYVQGVI MKTRGPVFVT AFNPLSMVIV AILGSIILAE
301: VMYLGRILGA IVIVLGLYSV LWGKSKDEPS NSFSDMDIEL PRSTPQVVTF SLNANTETDT MDASVVTSRH NTNESV
Best Arabidopsis Sequence Match ( AT2G39510.1 )
(BLAST)
001: MALKTWKPFI TVVSLQFGYA GLSIIAKFAL NQGMSPHVLA SYRHIVATIF IAPFAYFLDR KIRPKMTLSI FFKILLLGLL EPTIDQNLYY TGMKYTSATF
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV
Arabidopsis Description
WAT1-related protein At2g39510 [Source:UniProtKB/Swiss-Prot;Acc:O80638]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.