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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra012567.1-P
Bra013361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G39510.1 Bra012567.1-P AT4G19030.1 21798944
AT2G39510.1 Bra013361.1-P AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07016 Canola plasma membrane 98.67 98.4
CDX93255 Canola plasma membrane 97.6 97.34
Bra005033.1-P Field mustard plasma membrane 90.93 90.93
AT2G39510.1 Thale cress plasma membrane 89.07 89.3
Solyc06g031710.2.1 Tomato plasma membrane 53.6 55.22
PGSC0003DMT400076318 Potato plasma membrane 53.87 55.19
Bra000002.1-P Field mustard golgi, plasma membrane, vacuole 51.73 53.59
Bra017186.1-P Field mustard plasma membrane 51.73 52.43
Bra005193.1-P Field mustard plasma membrane 52.27 51.58
PGSC0003DMT400071320 Potato plasma membrane 50.67 50.4
Solyc04g011340.2.1 Tomato plasma membrane 50.4 50.27
Bra017185.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 49.87 50.0
Bra023428.1-P Field mustard plasma membrane 48.27 47.76
Bra040619.1-P Field mustard plasma membrane 48.27 47.38
Bra014029.1-P Field mustard plasma membrane 47.2 46.83
Bra010139.1-P Field mustard golgi, plasma membrane, vacuole 46.4 46.65
Bra008810.1-P Field mustard plasma membrane 44.27 46.5
Bra010143.1-P Field mustard golgi, plasma membrane 42.67 45.45
Bra012297.1-P Field mustard plasma membrane 44.0 45.45
Bra009296.1-P Field mustard plasma membrane 45.33 42.61
Bra003245.1-P Field mustard plasma membrane 41.6 41.6
Bra014682.1-P Field mustard plasma membrane 40.53 40.86
Bra007258.1-P Field mustard plasma membrane 39.47 39.26
Bra004592.1-P Field mustard plasma membrane 40.8 38.83
Bra016963.1-P Field mustard plasma membrane 39.73 38.5
Bra000212.1-P Field mustard plasma membrane 40.0 38.17
Bra001699.1-P Field mustard plasma membrane 32.0 34.19
Bra018748.1-P Field mustard plasma membrane 32.53 33.89
Bra021301.1-P Field mustard plasma membrane 32.27 33.61
Bra003751.1-P Field mustard plasma membrane 33.87 32.9
Bra015839.1-P Field mustard golgi, plasma membrane, vacuole 33.33 32.22
Bra008201.1-P Field mustard plasma membrane 33.07 31.79
Bra012063.1-P Field mustard plasma membrane 29.33 29.41
Bra038272.1-P Field mustard plasma membrane 27.73 27.88
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 28.0 26.38
Bra027605.1-P Field mustard plasma membrane 26.93 26.37
Bra027604.1-P Field mustard plasma membrane 26.67 26.04
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 27.2 24.7
Protein Annotations
EnsemblPlants:Bra017068.1EnsemblPlants:Bra017068.1-PEnsemblPlantsGene:Bra017068GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:EamA_domInterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF18PFAM:PF00892SUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI0002544BACUniProt:M4DKN7MapMan:24.2.1.5::
Description
AT2G39510 (E=3e-191) | nodulin MtN21 family protein
Coordinates
chrA04:-:16809267..16811033
Molecular Weight (calculated)
40760.6 Da
IEP (calculated)
9.527
GRAVY (calculated)
0.549
Length
375 amino acids
Sequence
(BLAST)
001: MALKTWKPFL TVISLQFGYA GLSIIAKFAL DRGMSPHVLA AYRHIVATIF IAPFAFFLDR KVRPKMTLPI FFKIALLGLL EPTIDQNLYY TGMKYTSATF
101: TAAMTNVLPA FAFLMAWIFR LEKVNIRKIH SQAKILGTVV TVGGAMLMTV VKGPLVPLPW ANPNDSHQDS SNPGVTPDLT KGALLIAIGC ICWAGFVNLQ
201: AITLKSYPVE LSLTAYICLM GSIESTIVAL FIERGNPSAW AIQLDSKLLA AVYGGVICSG VGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MYLGRILGAI VIVLGLYSVL WGKSKDEPSN SFSDMDIELP RSTPQVVTFS LKANTETDTM NASVVNSRNN TNESV
Best Arabidopsis Sequence Match ( AT2G39510.1 )
(BLAST)
001: MALKTWKPFI TVVSLQFGYA GLSIIAKFAL NQGMSPHVLA SYRHIVATIF IAPFAYFLDR KIRPKMTLSI FFKILLLGLL EPTIDQNLYY TGMKYTSATF
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV
Arabidopsis Description
WAT1-related protein At2g39510 [Source:UniProtKB/Swiss-Prot;Acc:O80638]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.