Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- golgi 3
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g071920.2.1 | |
| Solyc03g005980.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G39510.1 | Solyc02g071920.2.1 | AT4G19030.1 | 21798944 |
| AT2G39510.1 | Solyc03g005980.2.1 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400071320 | Potato | plasma membrane | 96.54 | 96.29 |
| Solyc06g031710.2.1 | Tomato | plasma membrane | 66.76 | 68.96 |
| VIT_13s0019g00500.t01 | Wine grape | plasma membrane | 52.39 | 53.1 |
| AT2G39510.1 | Thale cress | plasma membrane | 51.6 | 51.87 |
| Solyc09g010360.2.1 | Tomato | golgi, plasma membrane, vacuole | 51.06 | 51.2 |
| Bra005033.1-P | Field mustard | plasma membrane | 50.53 | 50.67 |
| CDY20446 | Canola | plasma membrane | 50.53 | 50.67 |
| CDX93255 | Canola | plasma membrane | 50.53 | 50.53 |
| CDY53594 | Canola | plasma membrane | 50.27 | 50.4 |
| Bra017068.1-P | Field mustard | plasma membrane | 50.27 | 50.4 |
| CDY07016 | Canola | plasma membrane | 50.27 | 50.27 |
| CDY09817 | Canola | plasma membrane | 40.96 | 44.64 |
| Solyc10g080980.1.1 | Tomato | golgi, plasma membrane, vacuole | 44.15 | 43.34 |
| Solyc10g078270.1.1 | Tomato | golgi, plasma membrane, plastid | 44.15 | 43.34 |
| CDX85633 | Canola | plasma membrane | 42.82 | 42.48 |
| Bra023428.1-P | Field mustard | plasma membrane | 42.82 | 42.48 |
| CDX91104 | Canola | plasma membrane | 42.82 | 42.48 |
| Solyc11g012930.1.1 | Tomato | golgi, plasma membrane | 41.49 | 42.28 |
| Solyc12g098280.1.1 | Tomato | extracellular, golgi | 31.38 | 41.84 |
| Solyc10g080990.1.1 | Tomato | golgi, plasma membrane, plastid | 43.62 | 41.73 |
| CDY65991 | Canola | plasma membrane | 41.49 | 41.27 |
| Bra008810.1-P | Field mustard | plasma membrane | 38.83 | 40.9 |
| AT5G13670.1 | Thale cress | plasma membrane | 40.69 | 40.58 |
| Solyc03g118900.1.1 | Tomato | plasma membrane | 33.51 | 35.1 |
| Solyc09g089860.2.1 | Tomato | plasma membrane | 32.71 | 33.7 |
| Solyc03g005480.2.1 | Tomato | plasma membrane | 32.45 | 33.52 |
| Solyc04g012070.1.1 | Tomato | plasma membrane | 30.85 | 32.86 |
| AT4G24980.1 | Thale cress | plasma membrane | 21.81 | 30.37 |
| Solyc04g080940.2.1 | Tomato | extracellular, plasma membrane | 30.59 | 29.87 |
| Solyc08g075450.2.1 | Tomato | plasma membrane | 26.6 | 26.45 |
| Solyc08g075470.2.1 | Tomato | plasma membrane | 26.6 | 26.18 |
| Solyc12g096160.1.1 | Tomato | plasma membrane | 26.06 | 25.52 |
| Solyc08g075460.2.1 | Tomato | plasma membrane | 25.27 | 24.68 |
Protein Annotations
| MapMan:24.2.1.5 | InterPro:EamA_dom | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0032973 | GO:GO:0043090 | GO:GO:0080144 | UniProt:K4BPI9 |
| PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF18 | SUPFAM:SSF103481 | EnsemblPlantsGene:Solyc04g011340.2 | EnsemblPlants:Solyc04g011340.2.1 |
| TMHMM:TMhelix | UniParc:UPI0002765E20 | InterPro:WAT1-related | SEG:seg | : | : |
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4BPI9]
Coordinates
chr4:-:3817607..3821614
Molecular Weight (calculated)
40924.8 Da
IEP (calculated)
9.869
GRAVY (calculated)
0.501
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSNTKECLM KLLKRSKPYL AVIFLQFGFG GSAIIAKTAL NNGMSHYTFS VYRNLFAAVV FAPFAALLER KIRPKMTLSI FWKIMLLGLL EPVIDQNLYY
101: AGMKYTTATF ATAMCNVLPA ITFLLAWILR LENVNVWKVS SQAKIIGTII TLGGATIMSL VGGPIIGLPW TKHHSNVPTT KNVVSPNELN PVKGAIFIAA
201: GCFCWACFYN LQAITLKKYQ AGMSLTSLIC MSGALQGTAL TLLVQRGNFG IWSIKWGSSL FYASLYCGIV NSGIGYYVSG LIMNEKGPVF VTAFNPLNMV
301: IVAILGSFIL SEQLNMGRVV GAAVIVVGLY LVIWGTSKDK NSTKIVSTKE NVESNNDKEL ADIKSSNQLV IGDESV
101: AGMKYTTATF ATAMCNVLPA ITFLLAWILR LENVNVWKVS SQAKIIGTII TLGGATIMSL VGGPIIGLPW TKHHSNVPTT KNVVSPNELN PVKGAIFIAA
201: GCFCWACFYN LQAITLKKYQ AGMSLTSLIC MSGALQGTAL TLLVQRGNFG IWSIKWGSSL FYASLYCGIV NSGIGYYVSG LIMNEKGPVF VTAFNPLNMV
301: IVAILGSFIL SEQLNMGRVV GAAVIVVGLY LVIWGTSKDK NSTKIVSTKE NVESNNDKEL ADIKSSNQLV IGDESV
001: MALKTWKPFI TVVSLQFGYA GLSIIAKFAL NQGMSPHVLA SYRHIVATIF IAPFAYFLDR KIRPKMTLSI FFKILLLGLL EPTIDQNLYY TGMKYTSATF
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV
101: TAAMTNVLPA FAFIMAWIFR LEKVNVKKIH SQAKILGTIV TVGGAMLMTV VKGPLIPLPW ANPHDIHQDS SNTGVKQDLT KGASLIAIGC ICWAGFINLQ
201: AITLKSYPVE LSLTAYICFL GSIESTIVAL FIERGNPSAW AIHLDSKLLA AVYGGVICSG IGYYVQGVIM KTRGPVFVTA FNPLSMVIVA ILGSIILAEV
301: MFLGRILGAI VIVLGLYSVL WGKSKDEPSS SFSDMDKELP LSTPQIVLPS KANAKMDTND ASVVISRPNT NESV
Arabidopsis Description
WAT1-related protein At2g39510 [Source:UniProtKB/Swiss-Prot;Acc:O80638]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.